Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0552 ATGGACGCTAGCAGAATGGAGGCCGAGCGGCTACTCGGGGTCGCCGAAAAGCTCTTACAGAATCGGGATCTCAACGGCTCAAGGGACTTTGCCATTCTAGCTCAGGAAGCCGAACCCCTTCTGGAAGGTTCCGATCAGATCTTAGCCGTAATCGATGTACTTCTCGCGGCGGATAAACGCGTTAACAATCACCACGACTGGTACGCCATTCTTCAGGTGGATCGTCGATCCAACGATTTCGATCTCATCAAGAAACAGTATCGTCGTCTCGCGCTTCTCCTTCACCCGGATAAGAACAGGTTCTCTCTAGCCGATCATGCTTTCAGGCTCGTTGCCGAGGCATGGGCCGTACTATCAGATCAGGCCAAGAAGGCAAACTTCGACAAGGAGCTCAACTTCTTTACCAGGGTAGACTTGAGTATGCCTAGCTGGGTTCAACAAGACAAATTGCCAGTTCGGAGAGGTGGGCCGGGTCCCAGTGGTCGGAATCAAGGTTCGGATCCGAGGAATGGTGGCAGCGCCGCGAGGGAGGAAGAAGCGGATGAGAACTCACGCCGGAGACCGACCTTCTGGACGACATGCCCTTACTGTTACTACATATACGAGTACCCTAAGATTTACGAGAATTGTTGTTTGAGGTGCCAGAACTGTGAGAAGTCTTTCCATGGCGTTTCGATTCCATCTTTGCCGCCTCTTGTGCCGGGACAAGAGGCTTATCATTGTTGTTGGGGTTTCTTTCCGATGGGATTTTTCGTCGGAAATACTGGTGGCAAGTCGGGTGTGCCATCCGCTCTGGATTCGCCGCCACCGGTCTCAACTGCGCCGGCAGAGAATGGTATGCATAGCGTGCAACCTCCGGTGGCCCCAAGCTCTGCGGCTTCGAAGGGGGCGACGCCGGTTGTCTCGAATGGGACTGCTCCAGAGTTGGGCGATGTTAAGCGGAAGCGAGGAAGGCCTCGGAAAAATCCTTCGCCGGCATAA 981 0.5413 MDASRMEAERLLGVAEKLLQNRDLNGSRDFAILAQEAEPLLEGSDQILAVIDVLLAADKRVNNHHDWYAILQVDRRSNDFDLIKKQYRRLALLLHPDKNRFSLADHAFRLVAEAWAVLSDQAKKANFDKELNFFTRVDLSMPSWVQQDKLPVRRGGPGPSGRNQGSDPRNGGSAAREEEADENSRRRPTFWTTCPYCYYIYEYPKIYENCCLRCQNCEKSFHGVSIPSLPPLVPGQEAYHCCWGFFPMGFFVGNTGGKSGVPSALDSPPPVSTAPAENGMHSVQPPVAPSSAASKGATPVVSNGTAPELGDVKRKRGRPRKNPSPA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0552 326 PRINTS DnaJ domain signature 103 123 IPR001623 -
Alju08g0552 326 PRINTS DnaJ domain signature 87 102 IPR001623 -
Alju08g0552 326 PRINTS DnaJ domain signature 68 86 IPR001623 -
Alju08g0552 326 ProSiteProfiles dnaJ domain profile. 66 131 IPR001623 -
Alju08g0552 326 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 290 - -
Alju08g0552 326 Pfam DnaJ domain 66 128 IPR001623 -
Alju08g0552 326 CDD DnaJ 66 120 IPR001623 -
Alju08g0552 326 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Alju08g0552 326 SMART dnaj_3 65 123 IPR001623 -
Alju08g0552 326 Gene3D DnaJ domain 55 139 IPR036869 -
Alju08g0552 326 MobiDBLite consensus disorder prediction 149 184 - -
Alju08g0552 326 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Alju08g0552 326 MobiDBLite consensus disorder prediction 260 326 - -
Alju08g0552 326 MobiDBLite consensus disorder prediction 284 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0552 Alju-ChrAlju08 3964544 3965524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0552 4 323 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 47.507 2.35e-99 295