Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0549 ATGCAGACGCCCAGTCCCGGAGCCACCGTGGAGGTGGCCAAGAAACCCAAGGGCCGCCCTAAAGGCTCCAAGAACAAGCCTAGAGAAGCCGCACGTCCTCCCGTACCCCGCGACGGCGGCGACGTGATGGCTCCTTACATCCTCGAAGTTCCTGATGGCAACGACATCGTCCGGGCTATTTCTCAGTTTAGCATCAGCAAGAACACCGGCCTCTGCGTCCTTACCGCTTCCGGCACCATTACTAACGCCTCCCTCAGTCCCTCCTCCGCCGCTTCTGCTCCTGGCATCAATTGTCCCGGTCATCACGCCATCCTCTCCATGTCCGCCACATTCGCCCCTCACCAATACCCCACTGCGGGTTACGCCCCCAAACCCCTCACCGTCAGCCTGGCCGCCCGGAACGGCCACGTCATCGGAGGCTTGGTACTTGGCAGTTTGGTCTCAGCCGGCTCAGTCTACGTCATAGCAACTTCATTCAACGGCCCATCCTATTATGTATCATCATCACATGAAGATGAAGAGAGCGTGCGAAACACGGCCGCCGCCGGAGGAGAAATTGGGTACGCGACGTCTCACCTGCCTGGCGGTATTCCTATGTATAGAGATAACCTAACCGCCGTTCATGGGCTTTGGCCTCCAGTGATTAGGTCATCACTACCTGCACCGTCGACTCCTCAGTACTTGACTTAG 690 0.5812 MQTPSPGATVEVAKKPKGRPKGSKNKPREAARPPVPRDGGDVMAPYILEVPDGNDIVRAISQFSISKNTGLCVLTASGTITNASLSPSSAASAPGINCPGHHAILSMSATFAPHQYPTAGYAPKPLTVSLAARNGHVIGGLVLGSLVSAGSVYVIATSFNGPSYYVSSSHEDEESVRNTAAAGGEIGYATSHLPGGIPMYRDNLTAVHGLWPPVIRSSLPAPSTPQYLT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0549 229 ProSiteProfiles PPC domain profile profile. 40 183 IPR005175 -
Alju08g0549 229 MobiDBLite consensus disorder prediction 1 42 - -
Alju08g0549 229 CDD DUF296 45 159 IPR005175 -
Alju08g0549 229 Pfam Plants and Prokaryotes Conserved (PCC) domain 45 160 IPR005175 -
Alju08g0549 229 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 180 IPR014476 GO:0003680
Alju08g0549 229 MobiDBLite consensus disorder prediction 14 35 - -
Alju08g0549 229 SUPERFAMILY AF0104/ALDC/Ptd012-like 42 164 - -
Alju08g0549 229 Gene3D - 44 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0549 Alju-ChrAlju08 3942729 3943418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0549 8 217 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.969 7.52e-43 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0549 08 3942729 3943418 Alju08g0549 08 3942729 3943418 ECH