Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0538 ATGACGTGGGATGAGTGGGACAGCAATATCCCAGGAGGTGACCAACCTGACCAAGATTCCCATCTCAACTTCGATTTCTTCTCTGCTCTGTTCAAGCCCAAGGACTATTATAAGATTCTGGAAGTAGATTTTGATGCTACAGACGACGCTATTCGTTCCAATTACATTCGTCTAGCTCTGGTGCTGATTTTCACCGCCGAGCTTAGGGTTAACCTTTCTCTGCTTCTGTGGGCACAGAAATGGCACCCGGACAAGCAGGAAGACCAAGATGCTGCAACCTCACGATTCCAAGAGATAAACGAGGCTTATCAGGTCTTGAGCGATCCTGCCAAAAGGAGAGAGTATGACAAAAATGGGATGCTTTATGTCTGTGATTGCAATCTCATGGATTATCTTAATCGTTACAAGAGCCTTATATTGACCTGTAATGGCCTTGGGATGAAGCAATTCATATGTCATGACATGGCATTTTCAGTCTATAAGAACAATCGGCTGTTGCCTGGAAAGATGAACTCAGAATATGGGTAA 528 0.4432 MTWDEWDSNIPGGDQPDQDSHLNFDFFSALFKPKDYYKILEVDFDATDDAIRSNYIRLALVLIFTAELRVNLSLLLWAQKWHPDKQEDQDAATSRFQEINEAYQVLSDPAKRREYDKNGMLYVCDCNLMDYLNRYKSLILTCNGLGMKQFICHDMAFSVYKNNRLLPGKMNSEYG 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0538 175 Pfam DnaJ domain 78 116 IPR001623 -
Alju08g0538 175 ProSiteProfiles dnaJ domain profile. 35 119 IPR001623 -
Alju08g0538 175 SMART dnaj_3 34 111 IPR001623 -
Alju08g0538 175 SUPERFAMILY Chaperone J-domain 28 61 IPR036869 -
Alju08g0538 175 CDD DnaJ 35 108 IPR001623 -
Alju08g0538 175 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Alju08g0538 175 Gene3D DnaJ domain 28 126 IPR036869 -
Alju08g0538 175 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 60 - -
Alju08g0538 175 PRINTS DnaJ domain signature 37 55 IPR001623 -
Alju08g0538 175 PRINTS DnaJ domain signature 91 111 IPR001623 -
Alju08g0538 175 PRINTS DnaJ domain signature 111 130 IPR001623 -
Alju08g0538 175 PRINTS DnaJ domain signature 74 89 IPR001623 -
Alju08g0538 175 SUPERFAMILY Chaperone J-domain 77 145 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0538 Alju-ChrAlju08 3871323 3873612 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0538 36 116 C2H2 Transcription Factor Family AT1G74250 34.884 2.34e-06 45.1