Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0536 ATGGCACCCAGTTTCGATTGTGTCTCGGCTCTTCTCTGTGCAGAAGACGATAGCATTTTCGACGATAACGATTATGGAGCTTCCACGGAGCCCTTGGAGGTTACGTGCGGACTCCATAACCAAAACATGTGCTTTCATGATCGAGACGATGGGTTGCCATTGCAGAGTGACGAGTGTGTAACGGAAATGGTGCAAAAGGAATGCGACCACTTTCCTGCCGGAGATTACCTGAATAGGCTAAAAACTGCGGATTTGGACTTTGGGGCCAGACAGGAGGCCCTTGATTGGATTGAAAAGGTTCGAGAGCACTTTGGCTTCGGCCCCCTCTGTGAATATCTGTCCATAAACTACCTGGACCGTTTCCTTTCATCATACGAATTACCAAAGGGAAAAGGCTGGACAATGCAATTGTTGGCCGTGGCATGCTTGTCTCTCGCTGCCAAAATGGAAGAGACTGAAGTTCCCCCGTCTCTTGACTTGCAGGTGGGCGGATCGAAATATGTATTTGAAGCAAGAACAATACAAAGAATGGAACTTTTGGTTCTAAGCACACTGAGGTGGAGAATGCAAGCCATCACTCCATTTTCCTTCATAGACTATTTTCTGTATAAGGCGAACGATGACCAGAGACCAGAAAGAAGTTCCATAATGCGATCCATCCAAATTATATCGGCCACAGCGAGAGGGGTTGACTTGTTGGAATTCAGGCCCTCGGAAGTTGCAGCGGCAGTGGCAATATGTGCATTGAGGGAAACCCAAACGGTGAATACGGATAAAGCAATTTCTGTGGTGAGTCAACATGTGAAAAAGGAGAGAGCGGTGGAGTGCTTGAAGTTAATAAAAGAGGTGGCATCATCAAACAGAAGACCTCAGAGTCCGATTGGGGTGTGGGAGGGTGCATTGTGCTTCAGCTATAAAAGCGAAGGATCAAGTAGCTCATGTGCGAGTTCGTCATCGTCACGTGATGTCCCAGATCCTAAAAGGAGGAAATTAAACAATAGTCACTGTGGAGAGGGGCTATTGTAG 1026 0.4717 MAPSFDCVSALLCAEDDSIFDDNDYGASTEPLEVTCGLHNQNMCFHDRDDGLPLQSDECVTEMVQKECDHFPAGDYLNRLKTADLDFGARQEALDWIEKVREHFGFGPLCEYLSINYLDRFLSSYELPKGKGWTMQLLAVACLSLAAKMEETEVPPSLDLQVGGSKYVFEARTIQRMELLVLSTLRWRMQAITPFSFIDYFLYKANDDQRPERSSIMRSIQIISATARGVDLLEFRPSEVAAAVAICALRETQTVNTDKAISVVSQHVKKERAVECLKLIKEVASSNRRPQSPIGVWEGALCFSYKSEGSSSSCASSSSSRDVPDPKRRKLNNSHCGEGLL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0536 341 SMART Cyclin_C_2 192 321 IPR004367 -
Alju08g0536 341 CDD CYCLIN_AtCycD-like_rpt1 89 187 - -
Alju08g0536 341 SUPERFAMILY Cyclin-like 174 280 IPR036915 -
Alju08g0536 341 CDD CYCLIN_AtCycD-like_rpt2 192 280 - -
Alju08g0536 341 Pfam Cyclin, N-terminal domain 59 189 IPR006671 -
Alju08g0536 341 SUPERFAMILY Cyclin-like 55 189 IPR036915 -
Alju08g0536 341 Pfam Cyclin, C-terminal domain 192 289 IPR004367 -
Alju08g0536 341 SMART cyclin_7 95 183 IPR013763 -
Alju08g0536 341 MobiDBLite consensus disorder prediction 308 341 - -
Alju08g0536 341 FunFam D2/4-type cyclin 73 186 - -
Alju08g0536 341 Gene3D - 62 270 - -
Alju08g0536 341 FunFam D6-type cyclin 187 278 - -
Alju08g0536 341 PANTHER CYCLINS 57 286 IPR039361 -
Alju08g0536 341 Gene3D - 73 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0536 Alju-ChrAlju08 3857551 3859443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0536 10 260 Core Cell Cycle Gene Families AT5G65420 51.383 2.96e-82 249
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0536 08 3857551 3859443 Alju08g0536 08 3857551 3859443 ECH