Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0531 ATGGGCTATCTTTCTTGTTATGCTAAGTCTGCGATCAACACCTGCCAATGCGATCCACTCTGCTGGGACCTAAACACATCTCCAAAAGCAAGAAATTCTAAGCGGAATAAGAAGCTACCGGAGATCAGAAAGTTTGAGTATTCGGACCTGGTGGCAGCCACAAACCGGTTCTCGGCAGATAGCTTTCTGGGCAAAGGCAGCCACAGCAGCGTCTACAGAGCAACCCTCGACGACGGCAAGCTCGTCGTTGCCGTCAAAGCATCAAAATTCAAAAAGCCTTCGGCGACAAGCCTCCTTAATCACCGCCCCAAATGTACGGGCTGTACCAAGTGTACCAGCCCCTCAGAGAACGAGGTCGAGATTCTCTCCCAAGTCCCAAGCTCTCGCCGCTTCGTCAACCTCGTCGGCTTCAGCACGGACTCCAACCTCAACAAATTGATAGTCGTGGAGTACATGCCCAATGGCACCCTCCACGATCTCTTGCACTCCGCGCCTAATCCGCCCGGTTGGGCCCGACGTGTCCGGTTCGCATTGCAGGTGGCAGAAGCGGTTCGGACTCTCCATTTTTCCAACCCGCCAATGATTCACCGGGACATCAAATCTTCAAACGTTTTAATCGACGGCGACTGGAACGCGAGATTGGGAGATTTCGGCCTTGCTCTCAGGGGCCACAAAACGGATTTTGGCGGGAAGGTCACTCTGCCGGCGGGGACTTTAGGATATCTCGACCCGTGCTATCTCACGCCAGGGGATCTAAGTGAGAAGAGTGACGTGTTCAGTTTCGGGATCTTGTTACTGGAAATCATCAGCAGTAGGAACGCAATCGACGTGAAGTACAGCCCACCGTCGATAGTTGAGTGGGCCATGCCGTTAATAAAGCAGGGTGAATTTGAGGCAATCGGTGACCCGCGGATGGGGACGCCGTCAGACCCGACGGTGATAGAAGGGCTGGCGGTGTTGGGGGCGAGGTGCGTGAGGTGGAAGGTGGAGAAGCGGCCAACGATGTCGGAGGTAGTGGAGTGTTTAAAACAAGTGAGGAAGAGGATTCATGGGTGGCCAATATGGAGGAGCGTGAAGAGGCGGACGGAGAAAGCAGAGTGGCTAATAAAGATGGGAAGCAGAAGAAATGGGAAGGTGTCGAGTGTGGGTGTTGCAGATCATGACACGAGTGAAGCTGGGAATGATCAAGAGGTGAGGTTGAAATCGATTGGTTGTGAAGGGGAGATGAAAATGCAGCGTAATCAGAGTGGAATTACTCAACTTGGGCTGTTGGTAAGAAGGAAGGGGGAGGAAGTGGGACTAAAAAGGTCGAGGTCCGTGGGAGTTTTACACAATCCACGGCTTTTACCTCGGCTGGGCTGA 1362 0.5316 MGYLSCYAKSAINTCQCDPLCWDLNTSPKARNSKRNKKLPEIRKFEYSDLVAATNRFSADSFLGKGSHSSVYRATLDDGKLVVAVKASKFKKPSATSLLNHRPKCTGCTKCTSPSENEVEILSQVPSSRRFVNLVGFSTDSNLNKLIVVEYMPNGTLHDLLHSAPNPPGWARRVRFALQVAEAVRTLHFSNPPMIHRDIKSSNVLIDGDWNARLGDFGLALRGHKTDFGGKVTLPAGTLGYLDPCYLTPGDLSEKSDVFSFGILLLEIISSRNAIDVKYSPPSIVEWAMPLIKQGEFEAIGDPRMGTPSDPTVIEGLAVLGARCVRWKVEKRPTMSEVVECLKQVRKRIHGWPIWRSVKRRTEKAEWLIKMGSRRNGKVSSVGVADHDTSEAGNDQEVRLKSIGCEGEMKMQRNQSGITQLGLLVRRKGEEVGLKRSRSVGVLHNPRLLPRLG 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0531 453 ProSitePatterns Protein kinases ATP-binding region signature. 63 86 IPR017441 GO:0005524
Alju08g0531 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Alju08g0531 453 SUPERFAMILY Protein kinase-like (PK-like) 40 353 IPR011009 -
Alju08g0531 453 Gene3D Phosphorylase Kinase; domain 1 27 151 - -
Alju08g0531 453 PANTHER OS01G0253100 PROTEIN 35 348 - -
Alju08g0531 453 Gene3D Transferase(Phosphotransferase) domain 1 152 352 - -
Alju08g0531 453 SMART serkin_6 57 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0531 453 ProSiteProfiles Protein kinase domain profile. 57 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0531 453 Pfam Protein tyrosine and serine/threonine kinase 61 342 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0531 Alju-ChrAlju08 3822651 3824012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0531 7 433 Receptor kinase-like Gene Family AT3G59420 33.259 1.50e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju08g0531 PK_Tyr_Ser-Thr 9e-31 CL0016