Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0530 ATGGAATTCGAGGAGCAAGATCAGGAACACGAAGAGGCAGAGGAAGAAATGGGGATACCCATGCCCCCGACGAGTTACGACTCGGCCCGGTCCAAACCAGGTGCTGCCTTCGGACCCGAGGGAGGTGCATCCAGCCCGACTGGTGGCAGGAAAGGCGGTCCGACCGGAACAGTCAGATACAGAGAGTGTCAAAAGAATCACGCCGTCAGCATCGGTGGCCATGCCGTTGACGGTTGCGGTGAGTTTCTGGCGGCGGGAGAGGAAGGCACGCTCGACGCTCTCAAATGCGCCGCCTGCAACTGTCACCGCAACTTCCACCGCAAGGAGATCGAGGGAGAAATTAGCTCCTTTCACCTGCCGCAGCCGCACCACCCTCAGTACCACCATCAATTTCCCCCTTACTACCGCGGGCCGCCTCCGGCGCCGGGCGCAGGGTACCTCCACCACCACCTGGCAAATCCGGCGATGGCACATCACCGGCCTTTGGCTCTACCAGCCGCGGCATCCGGCGGGGGACTGAGTAGAGAAGAGGAAGACATGTCCAATCCGAGCAGCAGCGGAGGCGGAGGTTTCGGCGGCGGAGGGGGCCGGAGCGAAAGGAAGAAACGGTTTAGAACGAAGTTCACGCCGGAGCAGAAGGAGAAGATGCTAGCATTTTCGGAAAAGGTTGGGTGGAGAATCCAGAAGCATGACGAACCGGCGGTGGAGCAATTCTGCGCGGAGACTGGAGTCAAGAGACAGGTACTCAAGGTTTGGATGCATAATAACAAAAACACTCTCGTTTTGTTTTGGGCAAATTCTGATGATAGTGATTTCCGATATGAAATGTGTGCACAACAACGTTGA 846 0.5745 MEFEEQDQEHEEAEEEMGIPMPPTSYDSARSKPGAAFGPEGGASSPTGGRKGGPTGTVRYRECQKNHAVSIGGHAVDGCGEFLAAGEEGTLDALKCAACNCHRNFHRKEIEGEISSFHLPQPHHPQYHHQFPPYYRGPPPAPGAGYLHHHLANPAMAHHRPLALPAAASGGGLSREEEDMSNPSSSGGGGFGGGGGRSERKKRFRTKFTPEQKEKMLAFSEKVGWRIQKHDEPAVEQFCAETGVKRQVLKVWMHNNKNTLVLFWANSDDSDFRYEMCAQQR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0530 281 MobiDBLite consensus disorder prediction 1 58 - -
Alju08g0530 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 38 260 - -
Alju08g0530 281 Pfam ZF-HD protein dimerisation region 58 110 IPR006456 -
Alju08g0530 281 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 109 IPR006456 -
Alju08g0530 281 SUPERFAMILY Homeodomain-like 187 259 IPR009057 -
Alju08g0530 281 NCBIfam homeobox domain, ZF-HD class 201 258 IPR006455 -
Alju08g0530 281 Gene3D - 191 261 - -
Alju08g0530 281 MobiDBLite consensus disorder prediction 166 206 - -
Alju08g0530 281 FunFam Zinc-finger homeodomain protein 2 195 261 - -
Alju08g0530 281 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 59 110 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0530 Alju-ChrAlju08 3814717 3815760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0530 1 260 ZF-HD Transcription Factor Family AT4G24660 52.874 1.27e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Alju08g0530 ZF-HD_dimer 3.5e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2524 07 50987071 50987850 Alju08g0530 08 3814717 3815760 CCT
Alju08g0530 08 3814717 3815760 Alju08g0530 08 3814717 3815760 ECH