Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0522 ATGAAGAGTACGTCTAACAAGGAGGACCGTGGAGGCGCAGGCATCCCCAGACTGTTGAAACTTGAGCATGGACGTACCTGGGTTTCTGTGCGTCATGTTTCGGCACGGGCGCCGCCGTCAAGTGATCAGCTCATGGAGCCACCGACGGTGACCTACGACAACAAGACCATGGCCATCATCATGGGCGTGGTGGTCATCGTATTCTTCGTATCGGGCTTTGTTTCCCTGTACAGTCGTCAGTGCGGGAACCGACGGCGATTACGAGGCCACATCGACCTCACTTTTCCAATGGGGCTGTCGGGATCTGGTTCCCGGGCGCAGGGTCGGGGTGTAAGCCCGGAGATAATCCAGAGCTTCCCGACTTTCGCGTACTCGACGGTGAAGGGGAGGAGAGGGGCACTGGCATGCGCGGTGTGCCTGAACGAGTACCAAGACGACGAGACGCTGCGTTTAATCCCGAAATGCAGCCACGTGTTCCATCCCGAATGCATCGACGGCTGGCTCAAGTCTCACTACACGTGCCCCCTGTGCCGGGCCAACCTGTTGGTTCCCGTAGCAGCACAGAGCGAGAGCGAGGCGACGCCTTTGGTCCCCGTACAAGTTTCAGATTCAGAAGAAGAAGGAGAGAGTGATAACGGAGGAGTGATTGGAGGGAATATCAGAATGAATAGGAGTAGGACGGTGAAGGAGGAGAGGGTTCCAAGTCGGTCAAGGTCAACGGGATTTGTGATGGGGATACTCTTTGGGAGGTCTCGGTCAACGGGAGATGGGAGAGTGGAGGGGGAGAACTGGGAGAGATATACACTGAGGTGGGAGGAAGTGAAGAGAGAGAGGAGGCTGAAGCGGACAAAGAGCTGCGTCACGTTCACCGGAATGAGCAGCGGCCGGAGAGGGTATCGAACCAGAAGCGTGGGCAGCAGCCACTCCCACTCCCACTTCGCCTACGATCGCTTAATCACTTCTTATACATTCCCCTTCAACCCACCCACCACTCCTTCGTCTTCTTTGTGA 1011 0.5658 MKSTSNKEDRGGAGIPRLLKLEHGRTWVSVRHVSARAPPSSDQLMEPPTVTYDNKTMAIIMGVVVIVFFVSGFVSLYSRQCGNRRRLRGHIDLTFPMGLSGSGSRAQGRGVSPEIIQSFPTFAYSTVKGRRGALACAVCLNEYQDDETLRLIPKCSHVFHPECIDGWLKSHYTCPLCRANLLVPVAAQSESEATPLVPVQVSDSEEEGESDNGGVIGGNIRMNRSRTVKEERVPSRSRSTGFVMGILFGRSRSTGDGRVEGENWERYTLRWEEVKRERRLKRTKSCVTFTGMSSGRRGYRTRSVGSSHSHSHFAYDRLITSYTFPFNPPTTPSSSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0522 336 SMART ring_2 136 177 IPR001841 -
Alju08g0522 336 Pfam Ring finger domain 135 178 IPR001841 -
Alju08g0522 336 CDD RING-H2_EL5-like 136 178 - -
Alju08g0522 336 MobiDBLite consensus disorder prediction 198 219 - -
Alju08g0522 336 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Alju08g0522 336 FunFam E3 ubiquitin-protein ligase ATL6 100 184 - -
Alju08g0522 336 SUPERFAMILY RING/U-box 115 187 - -
Alju08g0522 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 111 183 IPR013083 -
Alju08g0522 336 PANTHER RING FINGER DOMAIN-CONTAINING 41 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0522 Alju-ChrAlju08 3754374 3755384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0522 56 298 Rapid Response to Elicitors AT3G05200 36.264 4.11e-41 146