LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g0506	ATGTTGGATTTCCTTGCCCTATCTTGCAATTTCGTTCTGATCACTATCTCTGTGCAATTAATACACATTTTAGAAATAGTTTTGGTAAAACTAAAAGGGAAAAAAGAGGAGCTTTCTCTATTAAGAACGAGGGGCAAGTTATATTCAAGTGTGTTGAAGTTTGCACTTAGGGACACTCGCATATGCTACAGGTTGAGATTTGTACTTAGCTTGACTTCATCTGGTTTTGTACTTCTCATTACACTCTGTATTATAGCAAATTATCCTTCACTGATGAATTCAAGTGCTCATGTTCCTTCTTTCAACGCTGAGGATTCTCCTGTTCCTTACTTCACACTGGACTCAACAATGAGGATGAATAGGATAAGGTGTGGCAAAAAGAACATGGAGCGTTACGAGATTGTCAAAGATATTGGGTCTGGGAATTTTGCTGTAGCTAAGCTAGTTAGGGATAAGGGGACTAAGGAGTATTTTGCCGTCAAGTTTATTGAGAGAGGCCACAAGATTGATGAACATGTGCAAAGGGAAATCATGAACCATAGATCATTGAAGCATCCCAATATTGTTAGATTCAAAGAGGTCCTCCTAACGCCAACTCATCTTGCCATAGTGATGGAGTATGCAGCCGGTGGGGAACTCTTTGAGAGGATATGTAGCGCCGGTAGATTTAGTGAGGATGAGGCAAGATTTTTCTTTCAGCAATTGATATCAGGAGTCAGTTATTGTCATTCAATGCAAATCTGTCATAGAGATCTCAAGCTTGAAAATACGCTCTTAGATGGCAGTACTGCACCACGTGTTAAAATTTGTGACTTTGGATACTCAAAGTCATCTGTATTCCATTCACAACCTAAGTCTACTGTTGGCACTCCAGCCTACATTGCCCCTGAGGTACTAACAAAGAAAGAGTACGACGGAAAGATAGCAGATGTTTGGTCGAGTGGGGTCACCTTATATGTGATGTTAGTTGGGGCTTATCCCTTTGAAGACCCAGAGGATCCAAAAAACTTTAGAAAAACCATAGGGAGGATACTTAGTGTCCAATACTCAATCCCAGATCATATACGAGTTTCCATGGAATGTAAACATCTCCTGTCACGAATATTTGTGGCCAATCCTGAAAAGAGAATAAGTATGATGGAGATTAAGAACCACCCGTGGTTTCTGACGAACTTGCCCATTGAACTAATGGAAGGAGGGAGCTGGCAGAGCAATGATGTGAATAATCCATGGCAAAGTGTGGAGGAAGTGCTGTCCATAATAAAAGAGGCAAGAAAACCTCCCAATGTCCCCATGGTTGGTGGTGGCCTTCTTGCTGGAGGCAGCAGCATGGACCTTGATGACTTGGATGCTGATGCAGATTTGGAAGATATAGGGACAAGTGGCGACTTTGGGGGGTATATTTAA	1407	0.4165	MLDFLALSCNFVLITISVQLIHILEIVLVKLKGKKEELSLLRTRGKLYSSVLKFALRDTRICYRLRFVLSLTSSGFVLLITLCIIANYPSLMNSSAHVPSFNAEDSPVPYFTLDSTMRMNRIRCGKKNMERYEIVKDIGSGNFAVAKLVRDKGTKEYFAVKFIERGHKIDEHVQREIMNHRSLKHPNIVRFKEVLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVKICDFGYSKSSVFHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSSGVTLYVMLVGAYPFEDPEDPKNFRKTIGRILSVQYSIPDHIRVSMECKHLLSRIFVANPEKRISMMEIKNHPWFLTNLPIELMEGGSWQSNDVNNPWQSVEEVLSIIKEARKPPNVPMVGGGLLAGGSSMDLDDLDADADLEDIGTSGDFGGYI	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g0506	468	PANTHER	SERINE/THREONINE KINASE	129	403	-	-
	Alju08g0506	468	SMART	serkin_6	132	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju08g0506	468	FunFam	Serine/threonine-protein kinase SRK2E	208	396	-	-
	Alju08g0506	468	SUPERFAMILY	Protein kinase-like (PK-like)	108	398	IPR011009	-
	Alju08g0506	468	FunFam	Serine/threonine-protein kinase SAPK2	129	207	-	-
	Alju08g0506	468	ProSiteProfiles	Protein kinase domain profile.	132	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju08g0506	468	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	247	259	IPR008271	GO:0004672\|GO:0006468
	Alju08g0506	468	Pfam	Protein kinase domain	132	388	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju08g0506	468	Gene3D	Transferase(Phosphotransferase) domain 1	208	394	-	-
	Alju08g0506	468	ProSitePatterns	Protein kinases ATP-binding region signature.	138	161	IPR017441	GO:0005524
	Alju08g0506	468	CDD	STKc_SnRK2	131	387	-	-
	Alju08g0506	468	Gene3D	Phosphorylase Kinase; domain 1	115	207	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g0506	Alju-ChrAlju08	3640297	3644534	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g0506	127	416	CBL-interacting serine-threonine protein kinases	AT4G24400	39.933	4.68e-65	214

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_OST1L	Alju08g0506		Pkinase	3.8e-71	CL0016