Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0505 ATGGAACCTTCTACGGCTCAGATGGGGGGAGGACCCCGAGATCGCAGAGCTGATGCTCTTGGAGACCTTCGAGTCCTCCCCGATGAAATCCTCTGCACAATTTTAGAAGAACTCACTCCTCGTGATGTTGCTGGCCTCTCTTGCGTTAGCAGCGTAATGTACATACTGTGCGATGAAGAACCATTATGGATGACTTTATGCCTTAAAGGAGCGTCTGGTTTACTTCAGTACAAAGGCTCTTGGAAGAAAACTGCTCTGCATCGTGAGAATTTGCCAGACAAATACATTGAGTGTAACAGAGGATTTCTGCATTTTGACGGATTTAATTCGTTATATTTGTATAGAAGATTGTACAGGTGTCATGCCAAGTTGGATGCATTTTATGTGGATAATGGAAATGTGGAAAGAAGAAAAGATATCTCTCTAGAAGACTTCCGTGATGAGTATGATGGGAAGAAACCGGTAATGCTTACTGGATTGGCTGATGCGTGGCCTGCAAGGCATAAGTGGACAACTGATCAGCTGTTGATAGACTATGGAGATGTTGCATTTAAGATTTCACAACAGAGTTCTCGGAAGATCTTGATGAAGTTTCAGGATTATGTTTCATATATGAAACTGCAGCATGATGAAGATCCATTGTACATTTTTGATGAAAAGTTTGGTGAAGTTGCACCCAGCTTGCTGAAGGATTACTGTGTGCCTCATTTGTTTCAAGAAGACTACTTTGATATTTTAAATGAAGATAAACGACCACCCTACAGGTGGCTCATAATTGGGCCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCTGCTCTTACCAGTGCATGGAATACTCTTCTTTCTGGTCGCAAAAGGTGGGCATTGTATCCTCCAGGAAAGGTGCCTTTGGGAGTCACAGTGCATGTCAATGAAGATGATGGTGATGTTAACATTGAGACACCATCATCACTGCAGTGGTGGCTGGACTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATTGAGTATACACAACTACCTGGAGAGACAATTTATGTTCCAAGTGGATGGTGGCATTGTGTTCTAAACTTGGAAACAACTATCGCTGTCACGCAGAACTTTGTGAATTCCAGTAACTTTGAATTTGTATGTTTGGATATGGCCCCTGGTTATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTAGCTCTTGATGATGATGGTTATGAAGATGTCAAAAAGAATATGTTCTGTGATGAGCAGAATTCAAGTTATTCCATTATGTCAAGGAGGGAGAAAAGAACCAGAAACGATGAAGATGGGGATGATTTGAATAATGAAAGAACAAAAAATGGTGCATCTAGATATGATGTATGGAAAGATGGTTTTTCTTATGATATAAAATTCTTATCCATGTTTTTGGATAAAGATAGGGACCACTACAGGTCCTCTTGGAGCTCAGGCAACAGCATTGGCCAGCGAGAACTAAGAGAATGGTTATCCAAAATATGGGTTGGAAAACCAGAAATGAGAGAGCTGATATGGAAGGGGGCTTGTATTGCGCTAAATGCTGACAAGTGGTCAGAATGCGTGTATGAAATTTGTTCCTTGCACAATATGCCCTTTCCCCTTGATGATGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTTTTTCTTGTGGGAAACACTGTTGTCAAAATGTTTGTTGAACGAGGGCTAGAAGCTGCACTTTATGGTCTAGGCACAGAGCTTGAGTTTTACAATATATTGCATGAAGTCAACTCCCCTCTCAGGAATCATATTCCTGAGGTTTTGGGCAGCGGCATTCTTTATCTTGACAACGGAATGTATACCAACCTTCCTTGGGATGGAAAGGGAGCCCCTGATATTGTCACCAAGAATAATCTAACTGGGCAAAAATGTGAAGTTGATGATTTCTCATTTGGTGTATGGGGCAAGAAACAGTTTGAATATAGGAATGCTGAGATGCCAAAACCTGAATCAGTTAGTTCAGCTGGCCCCTCAAATATATGGCCTTATATTATAACAAAACGTTGTGAGGGTAAAATATTTGCAGAGTTAAGAGATAGACTATCAAGGGAAGATGTAGCAAACTTAGCTTCCTTCCTGGGAGAGAAGTTGCGCCACATTCACCTCTTACCACGTCCACCGCTGAACATTTCACCTTTCTCTGATATTGAACAGGATTCAGGCTTGCCTAAGATTAGTGGTAATATTGCAAGTTTTAATTCTACATCGAGCATGGTAGCAGAGTGGGAAATCTTCATTGGAACATTAACAAGGAGAAGGAAGGATGTCTTGAGCCGTTTGACTAAGTGGGGAGACCCGATCCCTAGGAAATTGATAGAGAAGGTCGATGAATATATCCCTCATCTATTTGGAAATATGTTGACTATAACTGAGGGCAATGCTTGTAAACCATGCTCCTGGATACACTCTGACATTATGGATGATAACATTTACATGGAACCATCTTGTGTTTCTACCTCAAGTGAAACTTTTGGTGAGGAAGCGCAGGCAGGCAATTGTTTTTTGTGTGATTCCAGTGTAAATAGAGATGTGAAATCATGGCGTCCTAGCTACATCCTTGATTTCAGTGATCTTTCAATAGGTGATCCTATGTTTGATTTGATACCGATTTATTTAGATGTATTTAGAGGTGATTCCTATCTCCTAAAGCTATTTTTAGAAAGCTACAAGCTTCCTTTTGCAATTAATAATTCAAAGAATGAGTCGGCGGAGAATGATGATAAATTTGGCCGACTTTCATATCTTGCCATGTGCTACTGTATATTGCATGATGATGATGTCTTGGGAGCTATTTTTAGCATATGGGATGAACTTAGATCAGCAAATTCGTGGGAAGAGGTTGAATTGACTGTGTGGGGGGAGCTGAACAATTACAGAGGCTTTCCTTGA 2928 0.4115 MEPSTAQMGGGPRDRRADALGDLRVLPDEILCTILEELTPRDVAGLSCVSSVMYILCDEEPLWMTLCLKGASGLLQYKGSWKKTALHRENLPDKYIECNRGFLHFDGFNSLYLYRRLYRCHAKLDAFYVDNGNVERRKDISLEDFRDEYDGKKPVMLTGLADAWPARHKWTTDQLLIDYGDVAFKISQQSSRKILMKFQDYVSYMKLQHDEDPLYIFDEKFGEVAPSLLKDYCVPHLFQEDYFDILNEDKRPPYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEDDGDVNIETPSSLQWWLDFYPLLADEDKPIEYTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSSNFEFVCLDMAPGYRHKGVCRAGLLALDDDGYEDVKKNMFCDEQNSSYSIMSRREKRTRNDEDGDDLNNERTKNGASRYDVWKDGFSYDIKFLSMFLDKDRDHYRSSWSSGNSIGQRELREWLSKIWVGKPEMRELIWKGACIALNADKWSECVYEICSLHNMPFPLDDERLPVGTGSNPVFLVGNTVVKMFVERGLEAALYGLGTELEFYNILHEVNSPLRNHIPEVLGSGILYLDNGMYTNLPWDGKGAPDIVTKNNLTGQKCEVDDFSFGVWGKKQFEYRNAEMPKPESVSSAGPSNIWPYIITKRCEGKIFAELRDRLSREDVANLASFLGEKLRHIHLLPRPPLNISPFSDIEQDSGLPKISGNIASFNSTSSMVAEWEIFIGTLTRRRKDVLSRLTKWGDPIPRKLIEKVDEYIPHLFGNMLTITEGNACKPCSWIHSDIMDDNIYMEPSCVSTSSETFGEEAQAGNCFLCDSSVNRDVKSWRPSYILDFSDLSIGDPMFDLIPIYLDVFRGDSYLLKLFLESYKLPFAINNSKNESAENDDKFGRLSYLAMCYCILHDDDVLGAIFSIWDELRSANSWEEVELTVWGELNNYRGFP 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0505 975 Pfam Cupin-like domain 150 372 IPR041667 -
Alju08g0505 975 ProSiteProfiles F-box domain profile. 20 66 IPR001810 GO:0005515
Alju08g0505 975 FunFam F-box protein At1g78280 114 371 - -
Alju08g0505 975 SUPERFAMILY F-box domain 16 82 IPR036047 GO:0005515
Alju08g0505 975 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 20 583 - -
Alju08g0505 975 Gene3D Cupin 118 371 - -
Alju08g0505 975 SMART cupin_9 214 381 IPR003347 -
Alju08g0505 975 SUPERFAMILY Protein kinase-like (PK-like) 674 907 IPR011009 -
Alju08g0505 975 ProSiteProfiles JmjC domain profile. 223 386 IPR003347 -
Alju08g0505 975 Pfam F-box-like 25 69 IPR001810 GO:0005515
Alju08g0505 975 SUPERFAMILY Clavaminate synthase-like 133 378 - -
Alju08g0505 975 Gene3D - 17 96 - -
Alju08g0505 975 MobiDBLite consensus disorder prediction 424 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0505 Alju-ChrAlju08 3631758 3639333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0505 11 971 Glycosyltransferase AT1G78280 61.208 0.0 1209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Alju08g0505 Cupin_8 1.7e-20 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0505 08 3631758 3639333 Alju08g0505 08 3631758 3639333 ECH