Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0498 ATGGCTTACCAGCATTACCGATCACAGTTCGGCGACACAACATTCACCAAAGTGTTTGTGGGAGGACTCGCTTGGGAGACTCCCACTGAAGAAATGCGTAGATATTTCGAGCAGTTCGGAGACATTCTCGAGGCTGTTATAATCACCGATAAGAACACTGGAAAATCTAAAGGCTATGGATTCGTAACATTTCGTGATCCAGAATCAGCCAGAAGGGCCTGTGCTGATCCAAACCCAGTAATAGATGGAAGAAGAGCCAACTGTAATATTGCTTCTCTGGGACGTCCTCGACCTTCCCCACCCCGAGGGAAGACTACATTTCAAGGCGGAAGCACATCCTCACAGACTCAGAGTGGAGCATCGTACGGTGGCGCTCTGGCAGCGGTGCCGCCTCCTCCTCCACCTCCGGCGCCGGCGGGGCCTGGGCTGATGTACCCGCCATATGGATACTCTCCCTACTCTCCTGACTACGGCTACCACCAAGCGACACTGTACAATCCCCAGATTCAGCAGCCACAATACTACCAGCAAGTGTATGGAGCTTCATCATCAGGCGTGAGTTCCCCATATTACTACGGTTATTCAGTGCAGCCACCCAGAGCCTCTTATTCTACGCCCCAGCCTCATCGCCTGCCACCTGGACCCCCCTATCTGTACTACCCATACCCTCCTTCACCACCTTCACCTGCACCTGCACCTGCACCCCCACCACCAGTGGATCTCTCCTTCCCCGCTTATCGTCTCCCTCGACAACCCACACTGTTGAGGCAGCCCTTCCCTCCTTCTACTGATTCACAGCCCCAACAGACTCAGCAGCGTACCTCCCCTGAGACGACGGCCGGAGTACTGGTTACGGCGGCGGCTTCATCAGAGAGTCCGAATATTCAAGGGAAAAACTAA 900 0.5422 MAYQHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRPSPPRGKTTFQGGSTSSQTQSGASYGGALAAVPPPPPPPAPAGPGLMYPPYGYSPYSPDYGYHQATLYNPQIQQPQYYQQVYGASSSGVSSPYYYGYSVQPPRASYSTPQPHRLPPGPPYLYYPYPPSPPSPAPAPAPPPPVDLSFPAYRLPRQPTLLRQPFPPSTDSQPQQTQQRTSPETTAGVLVTAAASSESPNIQGKN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0498 299 Gene3D - 3 111 IPR012677 -
Alju08g0498 299 MobiDBLite consensus disorder prediction 104 122 - -
Alju08g0498 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Alju08g0498 299 SMART rrm1_1 17 89 IPR000504 GO:0003723
Alju08g0498 299 MobiDBLite consensus disorder prediction 91 140 - -
Alju08g0498 299 CDD RRM_RBM24_RBM38_like 16 91 - -
Alju08g0498 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 75 IPR000504 GO:0003723
Alju08g0498 299 MobiDBLite consensus disorder prediction 227 299 - -
Alju08g0498 299 FunFam RNA-binding protein 24-B isoform X1 3 112 - -
Alju08g0498 299 SUPERFAMILY RNA-binding domain, RBD 12 117 IPR035979 GO:0003676
Alju08g0498 299 PANTHER BOULE-RELATED 5 278 - -
Alju08g0498 299 MobiDBLite consensus disorder prediction 257 299 - -
Alju08g0498 299 MobiDBLite consensus disorder prediction 227 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0498 Alju-ChrAlju08 3575737 3578624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0498 12 92 C2H2 Transcription Factor Family AT2G19380 39.506 4.01e-15 73.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0498 08 3575737 3578624 Alju08g0498 08 3575737 3578624 ECH