Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0474 ATGACGAACCAGAACTTGGTTGTTCCTGATGAAAAATCACGTTTTAACACCATTATTGAGGTGACTCTGTCCATTTCTAACTCACCTATGCTTACAAGCACGGTGCTTAGTGGGATTTTCGGAACAAAGTTACTGAAGAGGCTTGACGATGGAGGAGGAAAAGGTGGAGCCAAAGTCAATGCCTGGATTGATTCAATGAGAGCTTCCTCTCCCACACGAACCAAATCCTCCCTTCCTGTTTCTCAAGACCAACACTTGAGTTCTTGGGCTCTTCATCATCCTTCAGCGATCAGCATGTTTGATCAGATAATCAATAAGTCAACAGAAAAGCAAATAGTAATCTTCCTCGACTACGATGGAACTCTCTCCCCAATTGTTGCAGACCCTGATAAAGCATTCATGACTAAGAAGATGAGAGCAACAGTGAAGGATATAGCAAAACACTTCCCCACAGCTATCGTGAGTGGAAGGCGTAGAGACAAGGTTTACAACTTTGTGAGATTAGCAGAGCTGTACTATGCAGGCAGCCATGGCATGGACATCAAAGGACCGACAAAAAGCCAAGGATCTAAGAAAGGTAATCAGGCAGCCCCGTTCCAACCCGCAAGCCAGTTCTTGCCCATGATCAATGAGGTCTACAAGATCTTGCTGGAGAAAACAAAGTGTGTGGAAGGGGCTAAGGTTGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGCGTTGACGAAAAGAGCTGGGGTGCACTGGCGGAGCAAGTGCGACTAGTGCTGAATCAGTACCCCAAACTGAAGCTGACGGAAGGTAGAAAAGTGCTTGAGATCCGACCAACCATCAAATGGGACAAAGGCAAAGCTCTTGAGTTTTTGTTACGTTCGCTTGGATTCGCCAATTTGAAGGATGTGTTTCCCATCTACATCGGGGATGACCGAACTGACGAGGATGCTTTTAAGGTGTTACGTAGGAGAGGCCAGGGGGCGGGAATTCTTGTGTCTAAAGTTGCCAAAGAAACAGAAGCTTCCTACACTTTACAGGACCCATCAGAGGTTGAGCAATTTTTGCGGCGTTTGGTAGACTGGAAAAGGGGGAGTAATGAGAGTGGAAGGAGAGTTGAGTAG 1119 0.462 MTNQNLVVPDEKSRFNTIIEVTLSISNSPMLTSTVLSGIFGTKLLKRLDDGGGKGGAKVNAWIDSMRASSPTRTKSSLPVSQDQHLSSWALHHPSAISMFDQIINKSTEKQIVIFLDYDGTLSPIVADPDKAFMTKKMRATVKDIAKHFPTAIVSGRRRDKVYNFVRLAELYYAGSHGMDIKGPTKSQGSKKGNQAAPFQPASQFLPMINEVYKILLEKTKCVEGAKVENNKFCLSVHFRCVDEKSWGALAEQVRLVLNQYPKLKLTEGRKVLEIRPTIKWDKGKALEFLLRSLGFANLKDVFPIYIGDDRTDEDAFKVLRRRGQGAGILVSKVAKETEASYTLQDPSEVEQFLRRLVDWKRGSNESGRRVE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0474 372 Pfam Trehalose-phosphatase 115 348 IPR003337 GO:0003824|GO:0005992
Alju08g0474 372 CDD HAD_TPP 113 350 - -
Alju08g0474 372 NCBIfam trehalose-phosphatase 110 358 IPR003337 GO:0003824|GO:0005992
Alju08g0474 372 SUPERFAMILY HAD-like 113 360 IPR036412 -
Alju08g0474 372 FunFam Trehalose 6-phosphate phosphatase 208 367 - -
Alju08g0474 372 Gene3D - 205 371 IPR023214 -
Alju08g0474 372 Gene3D - 112 197 IPR023214 -
Alju08g0474 372 NCBIfam HAD-IIB family hydrolase 114 323 IPR006379 -
Alju08g0474 372 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 52 366 IPR044651 GO:0004805|GO:0005992
Alju08g0474 372 FunFam Trehalose 6-phosphate phosphatase 112 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0474 Alju-ChrAlju08 3412976 3414930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0474 110 372 Trehalose Biosynthesis Gene Families AT1G06410 27.240 2.21e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2593 07 51528495 51530393 Alju08g0474 08 3412976 3414930 CCT
Alju08g0474 08 3412976 3414930 Alju08g0474 08 3412976 3414930 ECH