Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0448 ATGAGCAGCCTGAAAACGCTGTGTAGACCGCAGCCACTGTTCTCCTTCATCAGTTGCAGACAACTGTTTCGATGTAGGGCTTCATTTCGAAGCCCTAATTGCAAGCCTCGTTCTCCATCGCTGTCAATATATTCTACATGGTTGGATCCTCCGGGTTCGAGCAGAATTGAGTTTGGGTTTCGCGGCAGCCAGAGGAGAACCGTGGTGAAGGCATCGAATTGGACTGAGCAAAAATCCCCGTATGAAACTCTTGAATTAGAAAGAGATGCCGGTGATGAACAGATAAAGAATGCTTATAGACGCTTGGCCAAATTTTATCACCCAGATGTATATGATGGCAGAGGAACCCTTGAGGAAGGTGAAACAGCAGAAGCAAGGTTCATAAAGATTCAAGCTGCTTATGAATTACTTATAGATGACGAGAGGCGGCGGCAGTATGATATGGATAACCGAGTGAACCCAATGAAGGCATCTGAGGCATGGATGGAGTGGCTTATGAAAAAGCGAAAGGCTTTTTATCAGCGAGGTGATATGGCTATTGCTGCTTGGGCAGAGCAGCAACAGCGTGAGTTAAATATCCGTGCTCGTAGTCTATCTCGTTCAAAGATTGATCCAGAAGAAGAAAAGAAAATACTGGCACGAGAAAAGAAAGCTTTTGCTGAAAATTTCAACAATACCCTTAAGAGGCATACACTTGTATTAAAGAAAAGAGATTTAATGCGAAAAAAGGCTGAGGAAGAAAAGAAGAAGGCTATCACTCGGCTGTTGGCTGCAGAGGGTCTTGAGCTTGATTCAGATAGTGATGAGGCACTGTAG 816 0.4436 MSSLKTLCRPQPLFSFISCRQLFRCRASFRSPNCKPRSPSLSIYSTWLDPPGSSRIEFGFRGSQRRTVVKASNWTEQKSPYETLELERDAGDEQIKNAYRRLAKFYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDDERRRQYDMDNRVNPMKASEAWMEWLMKKRKAFYQRGDMAIAAWAEQQQRELNIRARSLSRSKIDPEEEKKILAREKKAFAENFNNTLKRHTLVLKKRDLMRKKAEEEKKKAITRLLAAEGLELDSDSDEAL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0448 271 ProSiteProfiles dnaJ domain profile. 79 150 IPR001623 -
Alju08g0448 271 SMART dnaj_3 78 142 IPR001623 -
Alju08g0448 271 Gene3D DnaJ domain 66 179 IPR036869 -
Alju08g0448 271 PANTHER CO-CHAPERONE PROTEIN DJLA 62 252 - -
Alju08g0448 271 Pfam DnaJ domain 80 147 IPR001623 -
Alju08g0448 271 PRINTS DnaJ domain signature 122 142 IPR001623 -
Alju08g0448 271 PRINTS DnaJ domain signature 99 114 IPR001623 -
Alju08g0448 271 PRINTS DnaJ domain signature 81 99 IPR001623 -
Alju08g0448 271 FunFam Chaperone protein dnaJ 65 170 - -
Alju08g0448 271 CDD DnaJ 80 139 IPR001623 -
Alju08g0448 271 SUPERFAMILY Chaperone J-domain 73 148 IPR036869 -
Alju08g0448 271 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Alju08g0448 271 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0448 Alju-ChrAlju08 3233438 3237674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0448 71 147 C2H2 Transcription Factor Family AT1G74250 36.364 6.79e-06 45.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0448 08 3233438 3237674 Alju08g0448 08 3233438 3237674 ECH