Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0413 ATGACGAGCTTGCACAGTTCTTTCGCCATCATGGGTATCGACTCCCTCCATGAACTTGATTTCTCCGGCTCCAGCAGCAGCACCACCCCTGCCGACGACGATGACTACGCCACCTCTTGCCATTGGAACCACTGGTCCCCCCTCGTCAACTGGGACGCCTTCCCCGGCCCTCAAGACGACTTCCACAGCCTCATAGAGTCTATGCTGGATGACTCTGCCGCCATCCTCAGCCCCCACCAACACGGCACAGAAGAAGGCTACAACTCCGCCCACTCATTTTCGACGGAAGTAACCGTGGCGGACGTGGAAGTAACGGAAGGTGTTGGGGATTTCAAGGGTCTCAGGCTAGTTCACCTTCTGATGGCAGCGGCCGAAGCCCTCTCCGGCGCCATTAAGAACTGTGATCTGGCTCGCGTGATATTGATTCGGCTCAACGAGTTGGTTTCCCCCGCCGACGGCTCCAACATGGAGAGGCTGGCGGCGTATTTTACGGAAGCCTTGCAGGGTTTGCTCGAAGGCCCAAAGAATAACAACCACCACCACAAGCATTTCATCGGCAGTGGACCCCACCGCGAGGACCACCCTCCACTGGATATGCTGGCCGCCTTCCAGCTCCTCCAGGACATGTCCCCCTACGTCAAGTTCGGCCACTTCACCGCGAATCAGGCCATCCTGGAGGCCGCGGCCAACGAGCGGCGAGTCCACATCATCGACTACGACATCATGGAAGGCATCCAGTGGGCCTCCTTCATTCAGGCCCTCGCTTCCAAAGCGGATGGGCTACCCGGCCCACACCTCAGGATCACCGCGCTGTCCAGAAGCGGAGGCGGAAGAAGATCCATTGCCACCGTGCAAGAGACGGGGCGTCGTTTGACGGCGTTCGCGGCTTCCGTGGGACAACCGTTCTCGTTTCATCAATGCAGGCTGGACCCGGATGAAACGTTTAGACCGTCCGGTCTGAAGCTGGTTCAAGGAGAGGCCCTGGTGTTCAACTGCATACTGCAACTCCCCCACCTCACTCACCGGGCACCCGAATCGGTGGCATCGTTCCTAAACGGAGCGAAGACGTTGAATCCGAGACTAGTGACAATGGTAGAGGAGGAGAAGGGGGTGAGCGGAGAAGGAGGGTTTGTGAGTCGGTTCATGGAGTGTTTACACCATTACTCGGCGGTGTACGATTCGGTGGAGGCGGGGATACCCATGCAGAGCGGGGCGAGGACGTTGGTGGAGCGGGTGTATCTGGGGCCCCGAATAGCCGGGTCGGTGGCCAGGATATACAAAAATGGAGATGAAGAGGAGAGAGGGTCGTGGGGGGAGTGGTTGGGTGAGGTGGGGTTCAAGGGAGTGGCCATAAGCTTCGCGAACCAATGCCAGGCCAATCTCTTGTTGGGACTCTTCAACGATGGGTTTAAGGCAGAGGTGTTGGGTTGCAATAAGTTGGTGTTGAGTTGGAGATCCAGGCGTTTGCTCTCTGCCTCTCTTTGGACTACGTCTTCTTCCCCAATGCCTCCTTCTCAGTCGTTAATATTCTAA 1533 0.5753 MTSLHSSFAIMGIDSLHELDFSGSSSSTTPADDDDYATSCHWNHWSPLVNWDAFPGPQDDFHSLIESMLDDSAAILSPHQHGTEEGYNSAHSFSTEVTVADVEVTEGVGDFKGLRLVHLLMAAAEALSGAIKNCDLARVILIRLNELVSPADGSNMERLAAYFTEALQGLLEGPKNNNHHHKHFIGSGPHREDHPPLDMLAAFQLLQDMSPYVKFGHFTANQAILEAAANERRVHIIDYDIMEGIQWASFIQALASKADGLPGPHLRITALSRSGGGRRSIATVQETGRRLTAFAASVGQPFSFHQCRLDPDETFRPSGLKLVQGEALVFNCILQLPHLTHRAPESVASFLNGAKTLNPRLVTMVEEEKGVSGEGGFVSRFMECLHHYSAVYDSVEAGIPMQSGARTLVERVYLGPRIAGSVARIYKNGDEEERGSWGEWLGEVGFKGVAISFANQCQANLLLGLFNDGFKAEVLGCNKLVLSWRSRRLLSASLWTTSSSPMPPSQSLIF 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0413 510 ProSiteProfiles GRAS family profile. 107 496 IPR005202 -
Alju08g0413 510 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 86 491 IPR005202 -
Alju08g0413 510 Pfam GRAS domain family 116 496 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0413 Alju-ChrAlju08 2937144 2938676 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0413 113 497 GRAS Transcription Factor Family AT5G41920 33.846 9.88e-54 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju08g0413 GRAS 6.2e-99 CL0063