LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g0395	ATGGACGGCTCTGCAATGGAGCTTAGTCCAAACAATCTGGGCACACTCAAGCGCCGGAATGCTCGCCGGAAGATGGTTCAGTCGACGTTGTTCCCTCAGAAAACTCAAGAGTCCGATCACAGAGCTGATGATCAACAAGTGGAAGAAGAGGCATACTGTTGTGCAAATGAGAACAGGAAAGGAAAGTCCAAACTGAAAGTTACTCCTCGAACCAAGAATTCAAAGCAAAAGGAGAGGCAGCTGCAGAATACTACGCCAGAGAACATGGGCACGCCCAAGCGCCGGAATGTCCGCCGGAAGTTGGTTCAGTCAACATTTTCCCCAAAGAAAACTCAAGAGTCTGATGATAGAGCTGATGAAAAGGAGGAGAACAATTGCTCTGGTGATCAACAAGAGAAAGAAGAGGCACATTGTTGTGCGAATGAAAATGATAAGGGAAAGTCCAATCTCAAAGCCACTCCTCCATCCAAGAATTCCAAGAAAAAGGAGAAGCAGCTGCAGAATACTACACCAAAGAAACGGTCACCCAAAGGGGTTAAGGGGGCAAGTTCACGGCAAATGTTGACCAATGTGGCACAGATCAATATGACAGTCCCTGATTTGCGTTTGGAGGCAAAACTGTCATCTGAGGAAAATTCAAGGATGTTTGCTGGAAGGCAAATACACCCCTTTTTTTCTTCATGGAAGGTTGGGAAGAAACCTCAGGAGTTAGCTGAATCAGGACAGAGTTTATGTGCAGCGAGGAGGAAGGATGGGGAAGTACTTGCATGTGCCCCTATTCATGTATTTGAAAATAATCAGGATGCCGATGATACATCATCGCCAGCCTGGAAAAACTGGACGTTTTTGGGGCATACTGCCAAAGAAAATTGTGGTCCAGAAAGTTCATTTTCATCTGTTTTTGAGGGTTCTATTGAACCCTTAAATATTGATAAGCTTAGCAGTACTTTTTATCCCTCTGGCGTTACAATTTCTCAAAATACCCTATCTTGTTCAGATCAACATTCTACAGAATCTACACCGCCTCAAGTAGAAAACTCAGCTGCACCAGCTGGCGGGCAAACAAGTCTTCAATCACTAGAAGCCAAACTGCAACAGGACATGAAAGCTGATACTGAGCAAGCAGGCTTTTTCAGAAAGACAGATCCTGAACTGCAGAGTAGATTTCTTCAAGAAAGCATGAGGTCATATTACCATAGCTGTGGAGATAAGACTGAGGGAACCTTATGGACATATAAGTACAAGCCAACAAAGGCCTTTGAGGTTTGTGGTAATGATGAGTCTGTGAAATTTTTGCGTGACTGGTTACAACTCTGGCATGGAAGACGCTATCAAAGCAAGAAGGATGCATTGTATAGGGATAAAGGTGATATGCAAGGTGATGACAATGATGATGCTGATTATGACTGTTCTCATTTTGACTATGATTCAGAAGACATGACCGAGGAGGATTCCCTGGAGAATGTTCTCTTAATTACTGGACCGATTGGGAGTGGCAAGTCTGCAGCTGTATATGCTTGTGCGCAAGAGGAGGGGTTTGAGGTTCTAGAGCTCAATGCATCAGACTGGAGAAATGGGACTACTGTCAGGCAGCACTTTGGAGATGCTCTTGGATCACTTGGGGTCAAAAGGTTATTGGAACACACTGATAGTTCACCAATGAAGAAAAAGAGTAAGCTATCCTCAGGCCTGGCTTTGCCTAGTAACAAAGCATCTGATGAGCTAAATGAAGGGGTAATTGGACCAATAACCATATCTGATGATGAAGCTGTCTCCCCAGGTGCAACATCTTGGATGTTACCCAAGCAGAGAAACTCAATTAGATATGATAATGTCCAAAAATTAATTCTATTTGAGGATGTCGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATACAACAAATTGCTGAGACAGCCAAGGGGCCAATTGTATTGACCTGCAATAGCGATAATCCACCTCTGCCAGATAATTTTAGTAGACTACATATCTCTTTCTCATTGCCATCCACAAAGGAGTTGCTGTGCCACTTGTACATGGTTTGTGTCACAGAAGGAGTAAACATTCATCCTCTTGTACTGGAGAAATTTATACAATCTTGTGATGGTGATATCCGCAAAACCTTGATGCATCTTCAGTTCTGGTTCCTGAGTAAAAGATTAAGAAAAGACAGAAAAGCTCAGAAATCGTATTGCTCAATTCCATTTGACCTTGAGGTTGGCCATCAGATTCTGCCCAAGATGATGCCCTGGGAATTTCCCTCTCAGTTATCTGAACTTATTGAGAAAGAAGTTACCAAGGTAATTACCACAATGGAAGAAAACTCTAGTTTGCTGGGGTTAGTTGAAGAACAGCTTGACGTGAATGAAAAGCAAAGTGATTCAGATGTCCAGCAGACGGGAACTGATTATATAGAGGCCAAGAAAGTAGAAATGCTTGAGAGGAATGGATCTATTACAGACTACATCGACTTGGAGGCTCAATTTCATGCTCTTTCTGAGACTTCAATTTCTTCTTTCACCCCAGTGGCACCTTCTAAACAAAAGATTCAAAGGAAGCTTGTAGTGATGTCCTCTGGTTCTGAGGATGAGGATTTAAATAATGGGCATCCTCTGGACATGTGTGATGATGCTAACAATGGACCACCTCTTGAGGAAAACAGTGATTCTCCATCTAAATTTCCTACGAATAATAAACATACTAGCGTATCATTTCTTAAGCTGGGTACCGGATTGGAGGAGTCCGAGGTGGACCTGAGTAAACATTTAGGAGCAGCTGATGATACGTGTTTAAATGAAACGTCCAAGTCATTTGATGTATCCTGTGTTCCAGAATCAACTTTCGTTCCTGAGACTGTTAATGAAGTAGAGACTCTCTCTGGAGCAGTGTCTTGTGGCAATCTTGCTGATCCTGTGGAAGTCTCTGTGAATAACGAGTCACTACCATCCACTTTCAGTGTTCGTAAGTGCTTAGCCAAGCGAGCACTAGATGATGATTTGCTGGGAAGTAACAAAATACCAGAATCTTCTCGAGAAGAGATCGTGCAGGATTTAATTGATGAAAATATGGAAACTACACCTGTGTATAATTTGATGGACGAATGCAGTCGAGTTGATTTCAAAACGAAGTCCAATTTTGTTGAACCCTTTCCATCAATGGGGACTGATGTTATGCATAAGCTGTGGAGAAAACTTCGTGAATGTCGAACAGATTTAAGACAGCATGCTGCCACTGAACAACCAGGTGCTTTTCAAGTTGTCAAACTAGCTTGTGGTATGAGCAATCTAATATCAGAGGCTGACTTGCTGTTTGGTAACTTCCAACAAAAAAATTTCGATATTTTGGAAGCTCCAACTTCACTTTCTAATGAAAGTACATTTAATTGGTATGATGAGCAAATGGCGTCCACTGTTGCTGAACATGGGTTTTGTTTTTATGCTAAGCACTCGTCAGATTTGGGGTTGAAGTCAAGCTGCGAGAACTGTGTGGATTTAACTTCGGAGATGTTGGCTTCCACTACTGACATAATGGCCCTGGGCTATTTATCCAGACAGGGCCTCACAAACCCCTATAATGGAAAGGACTTAGAGAACAAGTCAAGAAATGATTTGCCAGACAGGCAAATGCAGACATCGCTGTTCAATGTAGTGCAGTCCGTTGTTCCTAAAAGATCATCCTCAGCACCGAAAGGTGTTGCATTCAATGAATATCTATCTTCATTGCGCCTTATTGCTGGGTTAGAAGATCTGCGCATATCAAAAGGTGCTGCTGAAAAGACTAGAAGGCGAAGGGTGCGGGGTTCTCAGCATTACTTGAGCAAGGGTACCATGTCGTTGTCGCGTGAAGATATATCATTGTTGTGTGAAGGAGATCTGTACAGAGAGACTTTTTCCAAGTATATTGGTGCCAGCAACAAGGTGGATGGCAACTTTACATAA	3945	0.4269	MDGSAMELSPNNLGTLKRRNARRKMVQSTLFPQKTQESDHRADDQQVEEEAYCCANENRKGKSKLKVTPRTKNSKQKERQLQNTTPENMGTPKRRNVRRKLVQSTFSPKKTQESDDRADEKEENNCSGDQQEKEEAHCCANENDKGKSNLKATPPSKNSKKKEKQLQNTTPKKRSPKGVKGASSRQMLTNVAQINMTVPDLRLEAKLSSEENSRMFAGRQIHPFFSSWKVGKKPQELAESGQSLCAARRKDGEVLACAPIHVFENNQDADDTSSPAWKNWTFLGHTAKENCGPESSFSSVFEGSIEPLNIDKLSSTFYPSGVTISQNTLSCSDQHSTESTPPQVENSAAPAGGQTSLQSLEAKLQQDMKADTEQAGFFRKTDPELQSRFLQESMRSYYHSCGDKTEGTLWTYKYKPTKAFEVCGNDESVKFLRDWLQLWHGRRYQSKKDALYRDKGDMQGDDNDDADYDCSHFDYDSEDMTEEDSLENVLLITGPIGSGKSAAVYACAQEEGFEVLELNASDWRNGTTVRQHFGDALGSLGVKRLLEHTDSSPMKKKSKLSSGLALPSNKASDELNEGVIGPITISDDEAVSPGATSWMLPKQRNSIRYDNVQKLILFEDVDILFPEDRGCIAAIQQIAETAKGPIVLTCNSDNPPLPDNFSRLHISFSLPSTKELLCHLYMVCVTEGVNIHPLVLEKFIQSCDGDIRKTLMHLQFWFLSKRLRKDRKAQKSYCSIPFDLEVGHQILPKMMPWEFPSQLSELIEKEVTKVITTMEENSSLLGLVEEQLDVNEKQSDSDVQQTGTDYIEAKKVEMLERNGSITDYIDLEAQFHALSETSISSFTPVAPSKQKIQRKLVVMSSGSEDEDLNNGHPLDMCDDANNGPPLEENSDSPSKFPTNNKHTSVSFLKLGTGLEESEVDLSKHLGAADDTCLNETSKSFDVSCVPESTFVPETVNEVETLSGAVSCGNLADPVEVSVNNESLPSTFSVRKCLAKRALDDDLLGSNKIPESSREEIVQDLIDENMETTPVYNLMDECSRVDFKTKSNFVEPFPSMGTDVMHKLWRKLRECRTDLRQHAATEQPGAFQVVKLACGMSNLISEADLLFGNFQQKNFDILEAPTSLSNESTFNWYDEQMASTVAEHGFCFYAKHSSDLGLKSSCENCVDLTSEMLASTTDIMALGYLSRQGLTNPYNGKDLENKSRNDLPDRQMQTSLFNVVQSVVPKRSSSAPKGVAFNEYLSSLRLIAGLEDLRISKGAAEKTRRRRVRGSQHYLSKGTMSLSREDISLLCEGDLYRETFSKYIGASNKVDGNFT	1314

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	110	144	-	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	330	353	-	-
	Alju08g0395	1314	Gene3D	-	671	734	-	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	36	64	-	-
	Alju08g0395	1314	Gene3D	-	408	669	IPR027417	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	156	170	-	-
	Alju08g0395	1314	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	409	724	IPR027417	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	1	193	-	-
	Alju08g0395	1314	PANTHER	CELL CYCLE CHECKPOINT PROTEIN RAD17	85	1298	IPR004582	GO:0006281
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	859	900	-	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	549	568	-	-
	Alju08g0395	1314	FunFam	p-loop containing nucleoside triphosphate hydrolase superfamily protein	673	734	-	-
	Alju08g0395	1314	MobiDBLite	consensus disorder prediction	885	900	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g0395	410	720	Core DNA Replication Machinery Family	AT5G22010	21.875	3.64e-09	59.3

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju08g0395	08	2834888	2846489	Alju08g0395	08	2834888	2846489	ECH