Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0373 ATGGCTGAGATCATGTACAAAGGTACAACGCTACTTACGGACGGTGTGTTGTTATTGCTTCCATCGAAAGCGGCCTCGTCCTCTGTCCCAAGTTTGTGGTCGTTGTTGGCAATGTCAAGGCGAGAAACCTTGAGATTGTCAAGAATCTGGAATCTTAAGAATCCATCACAAAAGGGTTTCCATTACTTGACATTAAAGTTTTTCCAAAATTATACCTTCGCTCGTTCCCTCAAATACCAAACTCGCCTTGTCTCTGTTCAACGATCTCAGCCCACATCCATCAATTGTAGCAGAACACCCTCTTCCTTCCATATGGAGCCAGAAAAGGGAAAACAGTCTTCCCACAAAACCCCATACACTGAACTCGAGCAAGTCAACTCAGATTTCATCCTGGCAATCGCTTTGCAAGAGCAAGAGGGAACCTTCCCAATGCTCACCACCACGGACAGCGAAGAAAGCAGCAATGAAGATGAAAGTGAGTCCTCTTTTGAAGACGACGTTGAAGATGGAGATGCTGACTTTTCCGAGAGCCAAGAATTCGAATTAGGAGACCTTCAGTTTCTTGAGGGCGAAGGAAGCAATGACGATGATGATGAAGAAATGGAAGAAGAGGATGAGATTGATCCTGATGAAATGTCCTACGAAGAGTTGATCGAGTTGGCTGAGTTCATCGGAGAAGAAAGAAGAGGATTGTCTCCAAATGAAATCCATTCATGCCTTCATCCTTACACTTGCCATTTTGCAGAAAACAAGACAGGAATAGATCGTTGTGTGATATGTCAGGTTGAGTATGAAGAAGGTGAGGCACTCATGGCGCTTCATTGTGAGCACCCTTATCATTCAGATTGCATAACAAAGTGGCTTCAGATTAAGAAGGTTTGTCCAATTTGTAGCTCTGAAGTCTCCGCTCCAAAACTGGCTAACAACGTCCCTTAA 936 0.4412 MAEIMYKGTTLLTDGVLLLLPSKAASSSVPSLWSLLAMSRRETLRLSRIWNLKNPSQKGFHYLTLKFFQNYTFARSLKYQTRLVSVQRSQPTSINCSRTPSSFHMEPEKGKQSSHKTPYTELEQVNSDFILAIALQEQEGTFPMLTTTDSEESSNEDESESSFEDDVEDGDADFSESQEFELGDLQFLEGEGSNDDDDEEMEEEDEIDPDEMSYEELIELAEFIGEERRGLSPNEIHSCLHPYTCHFAENKTGIDRCVICQVEYEEGEALMALHCEHPYHSDCITKWLQIKKVCPICSSEVSAPKLANNVP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0373 311 MobiDBLite consensus disorder prediction 146 213 - -
Alju08g0373 311 MobiDBLite consensus disorder prediction 151 178 - -
Alju08g0373 311 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 244 309 IPR013083 -
Alju08g0373 311 SMART ring_2 257 297 IPR001841 -
Alju08g0373 311 FunFam E3 ubiquitin ligase BIG BROTHER-related 223 304 - -
Alju08g0373 311 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 100 202 IPR043312 -
Alju08g0373 311 ProSiteProfiles Zinc finger RING-type profile. 257 298 IPR001841 -
Alju08g0373 311 MobiDBLite consensus disorder prediction 90 117 - -
Alju08g0373 311 SUPERFAMILY RING/U-box 256 304 - -
Alju08g0373 311 Pfam Ring finger domain 256 297 IPR001841 -
Alju08g0373 311 MobiDBLite consensus disorder prediction 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0373 Alju-ChrAlju08 2714610 2715545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0373 157 301 C3H Transcription Factor Family AT3G63530 42.282 6.36e-30 112