Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0370 ATGTTCTCATTGAGTGACGGGCTCTTTGATCACGTGCCTATCTTACAAGTTGAAATGTACATGTCACAACTTAAACCAAATTTAAAGGCTTGTAAATGGCCATGGAATGCATTCATATTCACGCGTGGAAGGTTTCAACTTGATTTGGACTATAAATACAAGCCGTTCTTCTGTCTTCACACACACATTTTCAAATACAACTTGTCTTCCTCAACACATAAGCACAGATCAATGGGAAGCCAGCAGCAGCAACAGCTTGGAGGTAGCAGGCGCATAGCAGCCGTGGACGCTTCTCCTCCGGTTATCGAAAATGCAGACTCAAAGCAACAGGAACAACCCGGTTGGAAGAAGCTTTTGGCATTTATAGGTCCTGGTTTTCTGGTTTCCTTGGCTTACCTTGATCCTGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAACCACAGATATGAGCTGCTGTGGGTGATTCTCGTTGGGCTCATCTTCGCCCTCATCATCCAGTCCTTGGCTGCAAATCTTGGCGTGAGCACTGGCAAGCACCTTTCGGAATTGTGTAAAGCAGAGTATCCACGTTTTGTCAAGTATTGCTTATGGCTATTAGCTGAGCTTGCTGTTATAGCCGCAGACATCCCTGAAGTGATTGGCACCGCCTTTGCTCTCAACATACTCTTCCACATACCCGTATGGTGTGGAGTTCTATTGACTGGTTTGAGCACTCTCTTGCTTCTGGGTCTCCAAAGATTCGGGATAAGGAAGCTGGAATTGCTGATATCAACTCTGGTGCTTATAATGGCGGCATGTTTCTTCGGAGAAATGAGCTACGTAAAGCCACCAGCTTCTGGCGTAATCAAAGGCATGTTTGTCCCAAAACTCTCCGGTCAAGGAGCCACCGGCGACGCCATTGCCCTTTTCGGTGCTCTTGTCATGCCCCACAACCTTTTTCTCCACTCTGCTCTTGTCCTCTCCAGAAAAATCCCCAACACCGTGCGTGGCATCAATGAGGCATGTAGATATTTCCTAATAGAAAGTGGGATTGCTCTCTTCATAGCGTTTCTAATCAACGTGGCAGTGGTCTCTGTTTCTGGCACTGTTTGTTCTTCCCCCAACCTTTCCGGCGAAAACGCAGATCATTGCAGCGATCTTTCTCTTAACTCTGCTTCTTTCCTTCTCAAGAATGTTCTGGGACGTTCCAGCTCAACCATTTATGCCATCGCACTTCTGGCCTCAGGCCAAAGCTCTGCTATCACCGGTACATATGCAGGGCAATTCATTATGCAGGGTTTCTTGGACTTGAAGATGAAAAAATGGATTAGGAACTTGTTAACTCGGACTGTTGCCATAACTCCTAGTCTTATTGTCTCCCTGATTGGTGGATCATCTGGGGCAGGACGGCTTATCGTCATCGCCTCGATGATACTTTCATTTGAGCTTCCATTCGCTCTGATCCCACTCCTCAAGTTTAGCAGCAGCCGCACCAAGATGGGTCCTCACAAGAATTCTATGATTATTATAATCATATCATGGATTCTGGGGGCAGGGATCATCGGAATCAATGTGTATTACCTGAGTACAGGGTTTGTGGGTTGGCTGATCCATAACAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGATCATAGTGTTCCCATTGATGGCCATTTACATTGTATCAGTGATATACCTGACCCTAAGAAAAGACACTGTCAAGACTTATATTGAGACTAAGGACGACCCTACAATACAGAACCACATGGAAAAAGGGTTCATGGATCCTAATAATGCCCAGGTGGAATTGGGTAATGCTCCCTACAGAGAGGATTTAGCTGACGTCCCTTTCCCCCAGTAG 1845 0.4612 MFSLSDGLFDHVPILQVEMYMSQLKPNLKACKWPWNAFIFTRGRFQLDLDYKYKPFFCLHTHIFKYNLSSSTHKHRSMGSQQQQQLGGSRRIAAVDASPPVIENADSKQQEQPGWKKLLAFIGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILVGLIFALIIQSLAANLGVSTGKHLSELCKAEYPRFVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWCGVLLTGLSTLLLLGLQRFGIRKLELLISTLVLIMAACFFGEMSYVKPPASGVIKGMFVPKLSGQGATGDAIALFGALVMPHNLFLHSALVLSRKIPNTVRGINEACRYFLIESGIALFIAFLINVAVVSVSGTVCSSPNLSGENADHCSDLSLNSASFLLKNVLGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDLKMKKWIRNLLTRTVAITPSLIVSLIGGSSGAGRLIVIASMILSFELPFALIPLLKFSSSRTKMGPHKNSMIIIIISWILGAGIIGINVYYLSTGFVGWLIHNSLPKVANVFIGIIVFPLMAIYIVSVIYLTLRKDTVKTYIETKDDPTIQNHMEKGFMDPNNAQVELGNAPYREDLADVPFPQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0370 614 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 85 569 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 116 494 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 NCBIfam Nramp family divalent metal transporter 123 491 - -
Alju08g0370 614 Hamap Divalent metal cation transporter MntH [mntH]. 104 526 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 Pfam Natural resistance-associated macrophage protein 139 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 438 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 197 223 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 470 489 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 250 271 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 300 323 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 410 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju08g0370 614 PRINTS Natural resistance-associated macrophage protein signature 225 244 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0370 Alju-ChrAlju08 2694052 2699535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0370 87 614 Inorganic Solute Cotransporters AT1G15960 59.510 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0370 08 2694052 2699535 Alju08g0370 08 2694052 2699535 ECH