Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0367 ATGGCATTTACTGTACTGCAACTTTGGAAAGAACTCAAGAAGAAATCTTATAGGTGGAAGCAAGAGATAGCGCCAATCGTTCAGAGCTCCCAGCCATGGGTGGAGAAATATCGGCCAAAGCAAGTAAAAGATGTAGCCCACCAGGATGAATTGGTTCGAGCACTCACAAACACCCTCGAAACGGGAAGTTGCCCACACATGGTCTTGTATGGTCCACCCGGCACTGGAAAGACGACAACTGCACTTGCGATCGCCCATCAACTCTTCGGACCTGGGCTTTATAAGTCTAGGGTGCTGGAACTGAACGCAAGTGATGATCGCGGGATTAATGTTGTCGGACAAAGATTAAGGATTTCGCTGCTGTGGCTGTTAGTACCAATCAGCGCAAGAGATGAGGCAGACTCAAATGACCGAAGATGCTCTGGCATGCTTAATGCCTTGCGTCGTGCAATGGAAACTCACTCTAAGGTTACAAGGTTCTTTTTTATATGCAATTACATTAGCAGGATCATAGAACCACTTGCTTCAAGGTGTGCAAAATTCAGGTTTAAGCTGCTGTCAGAAGAAATCATGAGCAGCCAGATACTGTACATTTGCAGAGAAGAAGGGCTTAATCTTGACTCTGAGGCTCTTTCAACCCTTAGTTCCATTTCTCAAGGAGATCTCCGTAGGGCTATTACATACTTACAGGTCATTCCAACTGAGGTTGTGCAAGCATTTCTTGCAACATGCAAAAGTGGTAATTTTGATTTAGCAAACAAGGAAGTCAATGATTTCATTGCAGAAGGATATCCAGTCTCTCAGTTCCTAACTCAGTTATTTGAGGTCATTGTTGAAGTAGATGACATATCAGATGAACAAAAGGCTAGAATATCCAAGAAATTGGGTGAAGCAGATAAGTTGCTTTATGATCCCTTTATTTTGTCAGAGTGCCTTGTCGATGGTGGTGATGAATATCTGCAGCTTCTTGATGTGGCCAGCAATACAATTCGAGCTTGTTGCAACATGCCAGAGGGATTTTCCTTCGAGGGATAG 1035 0.4386 MAFTVLQLWKELKKKSYRWKQEIAPIVQSSQPWVEKYRPKQVKDVAHQDELVRALTNTLETGSCPHMVLYGPPGTGKTTTALAIAHQLFGPGLYKSRVLELNASDDRGINVVGQRLRISLLWLLVPISARDEADSNDRRCSGMLNALRRAMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKLLSEEIMSSQILYICREEGLNLDSEALSTLSSISQGDLRRAITYLQVIPTEVVQAFLATCKSGNFDLANKEVNDFIAEGYPVSQFLTQLFEVIVEVDDISDEQKARISKKLGEADKLLYDPFILSECLVDGGDEYLQLLDVASNTIRACCNMPEGFSFEG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0367 344 CDD AAA 48 178 - -
Alju08g0367 344 SMART AAA_5 63 189 IPR003593 GO:0016887
Alju08g0367 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 231 IPR027417 -
Alju08g0367 344 Gene3D - 235 331 - -
Alju08g0367 344 SUPERFAMILY post-AAA+ oligomerization domain-like 233 327 IPR008921 GO:0003677|GO:0006260
Alju08g0367 344 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 31 323 - -
Alju08g0367 344 FunFam Replication factor C subunit 4 232 331 - -
Alju08g0367 344 CDD HLD_clamp_RFC 186 230 - -
Alju08g0367 344 Pfam Replication factor C C-terminal domain 233 326 IPR013748 -
Alju08g0367 344 Pfam ATPase family associated with various cellular activities (AAA) 67 181 IPR003959 GO:0005524|GO:0016887
Alju08g0367 344 Gene3D - 187 234 - -
Alju08g0367 344 Gene3D - 24 185 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0367 Alju-ChrAlju08 2683110 2688335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0367 23 340 Core DNA Replication Machinery Family AT1G21690 60.907 2.82e-141 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0367 08 2683110 2688335 Alju08g0367 08 2683110 2688335 ECH