Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0359 ATGGCTAAGCCATTATTCGTCTTCCTTTCCATCCTCATCTCCCTTGTCTTCACCATCTCGCTTGCTGCTTCACCACCTTCTTCTTCTTCATGTCCCTTCGATCTCACCTACGTCCTAACCTTCCCCTGGGACACTTCAACTTGCCTTCATGTTGACCCCAAAAATAATGGAACCCAACACTGCTGCCAAACCCTCCTCAGTCTCTTCGGTGTTGGCATTGCTCAGCACCTCAAAGATACCTCCGTCTTCGAACTTCCCGATGTTAACACTTCCTCTTCTTGCCTCTCTGATTTCAGCACCAAGCTCTCTGCTTTATCAATCCATGCCGATATGGTCTCTACTTGTTTCAAGAACTCTACCCAGTTCGTTGCCAATACCTGGAGCTGTGCAGGAATCAAAACCGTCCAGGATTTTAATTCAAAGGTTGGCATGATGACACCTTTGGATACATCTTGTAATGGTGACCTCACGGGGCTAACTCGATGTGGTATTTGCCTTGATGCTGGTTTGAAGGTCAGTTCCCAATTGACGTCCATGGATCCAAACTCTACTAAATGTTTTTACTTTACAATTTTATATGCTGCTGCTTTTGTTAACAAGTTTGGTCCTGAAGATGTTAGAACAGCTAGTTGCATACTTGGTATGCCTCTGTCTAGTGCTGGAACAAAAGGGTCGTCTGACAGAGACCGTACTCTCAAGTTGAGTTTTGGGTTATTGGGAGCTGTTACCGGTATTCTTCTTGCTTTTCTTCTGATTTTTGTGTCCAAGAAGTGGGATAGGAGAAGGAGGGAAAATATTCATCACAGAGAAGTTGTGAGCAGCGTTAGGGCCAATGTTTTACCTCACACTGGGGCCAAATGGTTTCACTTGTCAGAGCTTGAAAAAGCCACTGGTAAATTTTCACAGAGGAATCTGATCGGTCAAGGATCTGATGGTGTTGTTTACAAAGGAACTCTTCAGGATGGCGGTTTGGTTGCAGTCAAAGAGATTTTGGATTTGGAAACCAAAGGGGATGATGAATTTTGCTATGAAGTAGAGATCATCAGCAAAATAAAGCACAGGAATCTTGTTGCTCTTCGAGGTTGTTGTGTCACAAGTGATAACTCCAAAGGTAAAAGGAGATTCTTGGTTTATGATTATATGCCGAATGGTAGCCTCAGTTACCAATTATCTCTTTCTGGAGCTAATAGGCTAACATGGCCACAGAGAAAGAACATAATTCTTGATGTGGCTAAAGGGCTCGCCTATCTGCATTATGAAATCAAACCCCCAATTTATCACCGTGACATAAAGGCCACCAACATACTTTTAGACTCCACAATGAAAGCTAAAGTTGCAGATTTTGGATTAGCCAAGCAGGGCAATGAAGGCCAGTCTCATCTCACCACAAGAGTTGCTGGCACGTATGGTTATTTAGCACCAGAGTATGCTCTCTATGGGCAACTAACAGAGAAGAGTGATGTTTATAGCTTTGGAATTCTGATTCTTGAAATCATGAGTGGAAGAAAGGTGCTTGACACTTCAAACTCGTCGATTCTTTTGATCACAGACTGGGCTTGGACGAATGCGAAGTCAGGTAAGATAGAGGAAATATTGGACGAGTCAATAAGAGAAGGAGGGCCAAAGAGGATAATGGAGAGGTTTGTTCTTGTTGGGATTCTCTGTGCTCATGTGATGGTGGCTTTGAGGCCTACCATTTCTGAGGCTCTCAAGATGCTTGAAGGTGACATTGACATTCCCAATTTACCAGACAGACCAGTGCCTCTGGGTCATGAGTCCTTTCAATCTTCTCTTTTGTATGGCTTTACAAGAAGTGGAAGATCTACACCGTTCGGTTCATCTATTCAAGTGTGA 1854 0.4353 MAKPLFVFLSILISLVFTISLAASPPSSSSCPFDLTYVLTFPWDTSTCLHVDPKNNGTQHCCQTLLSLFGVGIAQHLKDTSVFELPDVNTSSSCLSDFSTKLSALSIHADMVSTCFKNSTQFVANTWSCAGIKTVQDFNSKVGMMTPLDTSCNGDLTGLTRCGICLDAGLKVSSQLTSMDPNSTKCFYFTILYAAAFVNKFGPEDVRTASCILGMPLSSAGTKGSSDRDRTLKLSFGLLGAVTGILLAFLLIFVSKKWDRRRRENIHHREVVSSVRANVLPHTGAKWFHLSELEKATGKFSQRNLIGQGSDGVVYKGTLQDGGLVAVKEILDLETKGDDEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSLSGANRLTWPQRKNIILDVAKGLAYLHYEIKPPIYHRDIKATNILLDSTMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGILILEIMSGRKVLDTSNSSILLITDWAWTNAKSGKIEEILDESIREGGPKRIMERFVLVGILCAHVMVALRPTISEALKMLEGDIDIPNLPDRPVPLGHESFQSSLLYGFTRSGRSTPFGSSIQV 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0359 617 Pfam Protein kinase domain 301 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0359 617 Gene3D Phosphorylase Kinase; domain 1 260 380 - -
Alju08g0359 617 SMART serkin_6 300 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0359 617 Pfam SPARK 27 186 IPR043891 -
Alju08g0359 617 PANTHER OS01G0750732 PROTEIN 52 581 - -
Alju08g0359 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 381 581 - -
Alju08g0359 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Alju08g0359 617 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Alju08g0359 617 FunFam Receptor-like serine/threonine-protein kinase At4g25390 265 380 - -
Alju08g0359 617 ProSiteProfiles Protein kinase domain profile. 300 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0359 617 CDD STKc_IRAK 306 575 - -
Alju08g0359 617 SUPERFAMILY Protein kinase-like (PK-like) 285 589 IPR011009 -
Alju08g0359 617 Gene3D Transferase(Phosphotransferase) domain 1 381 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0359 Alju-ChrAlju08 2604656 2606509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0359 18 595 Receptor kinase-like Gene Family AT1G11050 53.963 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Alju08g0359 Pkinase 3.1e-44 CL0016