Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0347 ATGGGCTCGTGTGAGAGAATGGTAATGGCAGACGATGCGACACGCATACCTATTATCACGAAGCATTGTTCAGAGTTTCCATTGCAGTCTGTTCCCGTGGGGCAGTCCTGTTCAGAAGTAGGCTGCTCTGTGTTGGAGTCTAACATTGAGCTTTCCAATATTCTGAACAGTCGTAAATATTTCTCTACAAATAAAGAATCTGACTCTGCAAACTGTATTGATGTTACCGACATGCCCAGCAATGCTAGAGTAAGTGAATATGAAGATGCTGATATGTTGTTAGTGGAGAAAAATTTGGACAATGATTGTCAGAACTGTTGCAGGACATTTTGTGGGCAATGTGAAGTTTATAACCTAGAAAATGGTAGCTTATGCACAGAAGAAAAAACTCACAATCATGATTACTACCAGCTTCTATCAGAGTTTAAATCTGTAAACGGTTTGCCAAAGGATATGGAGAGCAATAGAATCCCTTCTGCAGTGGACACTTTAGCGGCTGTGGATGAAAAAAACAATGATTCTGGTTTACTCACTGATACGAGCAATCATATATTTGATTTCATTTATTCTGAATTTTCCTTGGAATCAGAACCTATACCTGGCTGTCTAGTCAATTTTCTCCAAAAGAGTGAGCAGGAGGATGTTCTGAGAAATACAGATCCCTTGGAGGTTGCAGGCAACTGCAATACTTCAGGCGGGATGGAAGTAACTGCTTGCAAGCAGATATCTCCCGCACATGGAAGTGAGTTGCCTTCTGATGCATTATATACAGATGCTCTATGTGGGATGAAAGTGGCTGTTTGCAACCAATCATCTTTGCATTCTAATAGCTCTAGTGATAAGTTTAAGCTGAGTGATCAGAAAGATGGTGGCGATTGCAACAGTCCTTATGAAGAATGGGTCAAAGACACTGTTGAGAAAAAGAGTATCATAGATGCATGTGCACAAGTATTGTCCCTGCCAACCTACCAGAGTACATTGGGGAGTTCAATGTTAGCTTATTCGAGTGAGGCTACACAATTGGAACAGGAGACTGATAAGAGTGACATTGATTCTTATGAAGATGTCACAAAATTTCTGGAGCAAAATGTTGATGGGATAAATGAAAGAAATGTTGAAATGAAGTATAATACATTGCAAATAGAAGGCAATTCCTCCAAATTGAAGGACAATTTGCCAGAAACTTCTACCTATTGTACCTTTTCTTCTGAATCAGGTCTGCCCTCCTTTGTTTCTTTAAATGATAACCCTTCAAAGGATGTGCCTGATCTCCTGCTTCAGGACGATAGCTGTGCTATCAGTTATAATAACAGTGCGTGCAATTCTGGACAGAAAAAAGGAAAGCAAAATGTCAAAATTGATTGTGTCACTAAAAGCAAATGTTCAGACATTGTGTCGTTGCCTCATCGAAGGAATAGTCGACAAAACAAATCTGTTTTTAAGCAACAGACTGGAAGGGCTCCAAGAAAATGCAATAAGCAAGCCAATGTGCCTCAACAGGAGTGGGGTGTGAAGACAATCTCAAAGACCTCTAGAAAGAAAAGAAGCTGTTTCTCCAGAGCGGCCCGCTCCTCTGAGTGGGGATTGCTAGGGAACATTAAACAGGCTATTGGAATGGATAGAGAGTTAAACACAAATAAAGTTATGCCTGAAGGATCGGGGAAGGCTAGGGGCAGATTTCAAAGTGGAAAAACAAATAAAGATCGTGAAAATTCTAACACATTCAATTCAATGTCTGGTGCTTCAACCTCTGGTATGCGTCTGAAGATCAAAGTTGGGAAAGGGTTTAACTTATATTACCCAAACGTCCTGGTTCCAGAATCTGTTTATGGCTTGACTTCTGCTTCCAACTTGGGACCTGGTTCAGGTTCTCAAAATTTAGGTAGCAAAAATGGAGACAAATTATTTGAAGAAGGAGCTATGAGAAAGTCTGAATCTGATAAAACTAAACTTTACCATGCTGTTGTTCTGAATGGGCAAATTCCCAACAACTTAGAAAGTGCTGCACTAATGGAGAAGTCAGATGGCGATGCAGAGGAGCCTTGTCTTGTGGCTCCTTCAAATAAGTTGGTTGATGCATTGATAGAGCCTGTCAATATTAAGAGTATGGATCCTGGAACTTCACCTGATTCAGAAGTGATTGATTCAATTCCTGATGTCCAGGTGGGAGAAAGGCATCGGGAAGATCTGAATAATACTGATTTTGGTTTTAAGGAGTTTAATTTTGCTGTTCATAATTCTGCCAGCAAGAGAAGGAAGAAGAAAGATAAACCTACTTGTTCACGTAATAGTAGTGTAAGAGATGTATCAGCAGGTTCCCCAAGGAAAAATAAAGCAGATTACTCAGAGAATCTTGGAGGTAAGAAGAACTGCACTGATGTGGTTAGCTCTGTGGATTTGCCTAGTTCCGCTGATATAAATACATTAAGCACAAGCAGTTCTGAAGACTGTGGAGTTCATACAGAACCATTGCACCTCTATGGAGATATTGGACTTAGAGATCCAACTGATGTGTTGGAAGTCAAAAGTAGTGTCGAGGTTGAGGCACATTGCAGCCCAGATGTTAACAGTGAATATTCGGGCTCCCCTGGTTCTGAGAAATTTCTGCCTTCTGAGAGACATTTGGATTCTAATCTTCTCAAAAATCTTAAATCTCATAATGTCAGCAAGACCAAGTCTAAAGCTTCCGAGTCAAAGAGCAGGAAAAAGACTGCTTGTAGGCACAAACTTGGGAGATCTGTCACCAAGTGTTGTGTTAAAGGAAATAGTGTCTCTGATAAAGTTATATGTGAAACAGAAGATTACCTACATGAAGAAAATGACACTGAAGAAATACAGAAGTTGGATTTCGGTGGAAAAATTAATGCTGATGAGAACAAAGTATCAGCCAGTCTGGACATGGTACCTAGTGCTGGTTCGGAGGAGCAGCATCCATCACCACGAAAGGCATGGGTGCGTTGTGATGATTGCTACAAGTGGCGGCGTATTCCTGCTTCACTTGCTGACGTAATTGAAGAAACAAACTGTGCCTGGACATGTAAGGATGGCGGTGATGAAGCTTATGCTGATTGCTCTATCGCACAGGAAAAGTCAAACGCTGAGATCAATGCAGAGTTAGGATTATCATATGCATCTAGTGAAGAAGACAATAATGGAGATCGCAAAAACTATAAGGAGTCAGAACATCAACGTCCAATGTCTTCTCAGGAATCAACTTTTACTCATATTTCTGCCAATGAGTTTCTGCATCGTAGCCGCAAAACTCAGACTATAGATGAGATAATGGTTTGCCATTGCAAGCCACCTCTAAAAGGTCAGTTGGGATGTGGAAATGAATGTCTAAACCGGTTGCTTAACATTGAATGTGTTCAAGGGGCCTGCTCCTGTGGGGATCTCTGTTCAAATCAGCAGTTCCAGAAACGCAATTATGCCAAAGTGAAGTGGTTTAAATGTGGGAAAAAGGGCTATGGGCTGAAGGCGATTGAGGACATATCTGCAGGGAAATTCCTTATTGAATATGTTGGCGAGGTGCTTGATATGCATGCCTATGAGGCACGACAAAGTGAATATGCTTTGAAGAGTCGTAGACATTTCTACTTCATGACCTTGAATGGCAGTGAGGTGATTGATGCAAGTGCAAGAGGAAATCTGGGGCGTTTCATTAATCATAGTTGTGATCCTAATTGTTGTACCGAAAAGTGGATGGTGAATGGAGAAATCTGTATTGGTCTGTTTGCATTGAGAGATATTAAGCAGGATGAAGAGGTGACATTTGACTACAACTATGTTAGGATTTTTGGCGCTGCTGCAAAAAAATGTTATTGTGGTTCACCTCATTGTCGAGGGTATATAGGTGGTGATCTACTCAACGCTGAAATCATTGTTCAAGATGATTCAGATGAAGAATTTCCAGAACCTGTGATGCTTACTGAAGGCGATATTGAAGACGGGCCAGGTGGTCACCCAGAGAAGGAGAATTCTCTAAACCCTGCCTCTTCCAGCTCTCAGCGGCACAGGCTGATTGAAGTGGAAAATTCGAAGGGCAATTTGTCATCGTCCCTTCAAATGAAAGTACTTTCCCAGCAAATGGATGATGTAAGAAGAAAACCTATGCCTGCCTTACAACAAGGATCTGCAGTAGAATCTGAGCATTCTGACAAAACTTTGATTCCGAATATGGGAACTTCCTCTTCATCTGTTAGCAAATTCAAGTATAAAGTAATTGAAGACAGATGTGGTCTTTCAGAACCTCATTTGCTTGTGAAGGCTTCTCAAATAAATGGTTCTGTTAAAAAAGGGAAGGCGTGTGCTAACCCTACTAATAATCTCAAAGTTGGAGTGACCACCAACAGAATGCAGGTTCCATCCATCAAACATAAAAAAGCAGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTGAGGAGAAGCTTAAGGAGTTGCTAGATCCAGATGGAGGAATTAGCAAAAGTAAAGATGCCACCAAAGGCTACTTGAAGCTTCTGCTTCTTACTGCGGCATCAGGTGATAGGAGTAATGGTCAAGCCATTCAAAGCAATCGAGACCTTTCCATGATTCTTGGAGCCCTTTTGGAAACAAGATCAAGAGCTGTGCTGAATGATATAATTAAAAAAAATGGTTTACGTATGCTACACAACATAATGAAGCAATACAGGCGTGACTTTAAAAAAATTCCAATTTTGCGAAAGCTTCTTAAGGTCATAGAGCGCCTGGCAGAAAGAAAGATTTTGACATTTGAGCATGTTAATTGTGATCCCCCTTGTCGTGGAATGGAGAGCTTTAGGGAGTCAATGCTGTCCTTAACGGAACATGAAGACAAAGAGGTCCATCAGATTGCTCGGAGCTTTCGAGACAGATGGATTCCTAGATCTCTCAGAAAACGTGACTTTATAAACAGGGATGACTGTGGGGTGAAATCTTATAGGAGTTTCAAACGCAACAGGTTTTCAACATCACCGAACAATACATGTGAACAGAGTTTGAGACCTACTAAAGCAATAGATTGTGCCCAGCCGTCATTGGTTGAAACAAGTTCAGCCAATGCTGTTGCCCAGGAGGGCTGCTCTGCCCCATATCTGAATGGGTGTGAAATCAGTGGCCAAATGAGACGTAAACGTAAAAGTCGATGGGATCAACCAGCAGAGACAAATTCAGTTGTAGCATCTCATGAGCACAAGAAAGGAAAAGTTGTCTTTGGGCAGAATATTTCTGAAGATGTTCCACCTGGGTTTTCATGTTTATTCCAGCCTTCGGGTTCTTCAAATGCCTCGCAGAATTCTGGTGATCTTGCTTTGCAACCTCCGGACCATTCTGGTTCTGGATGTCCCTCTGATGCAGTTATAGGCAATCCAAGGGAAAAATTTAATCCTCGCTTGCCTGTCTCGTATGGAGTTCCATTGCCTGTTATCCAACAATATGGAACACCTCAGGTGGAAAAGGAAGGCAGTTGGGTCACTGCACCAGGCATGCCTTTCTATCCGTTTCCTCCACCACCCCCGTATCTCCCCCAGAATGACTGTCAATCTTGCAAGTCCACTGATGCTATGCAAATAGACCAGCCTGCGGAAATTGTGAGGCCAGATTCGAGTGGTTTTGCTAATCGTTACTCGGATGATATGGCTCCCAGCACAACTGGTCTTGGTGCTCAAGACCTTTCATATGAGGATAATAACCACATCCCTAAACCATTGAAGAGTTCCCCCGATGATCTGGGGAGGAGCTTCTTTAGGCAACAAAAATGGAATAAATCAAAAATACCTCGACCGTGGTCGAGGAGGAAATTCTGGGGACATGATGAGAGCAACTCTATGGGTGGTGGTTCGGGCAATTTGTAG 5856 0.4191 MGSCERMVMADDATRIPIITKHCSEFPLQSVPVGQSCSEVGCSVLESNIELSNILNSRKYFSTNKESDSANCIDVTDMPSNARVSEYEDADMLLVEKNLDNDCQNCCRTFCGQCEVYNLENGSLCTEEKTHNHDYYQLLSEFKSVNGLPKDMESNRIPSAVDTLAAVDEKNNDSGLLTDTSNHIFDFIYSEFSLESEPIPGCLVNFLQKSEQEDVLRNTDPLEVAGNCNTSGGMEVTACKQISPAHGSELPSDALYTDALCGMKVAVCNQSSLHSNSSSDKFKLSDQKDGGDCNSPYEEWVKDTVEKKSIIDACAQVLSLPTYQSTLGSSMLAYSSEATQLEQETDKSDIDSYEDVTKFLEQNVDGINERNVEMKYNTLQIEGNSSKLKDNLPETSTYCTFSSESGLPSFVSLNDNPSKDVPDLLLQDDSCAISYNNSACNSGQKKGKQNVKIDCVTKSKCSDIVSLPHRRNSRQNKSVFKQQTGRAPRKCNKQANVPQQEWGVKTISKTSRKKRSCFSRAARSSEWGLLGNIKQAIGMDRELNTNKVMPEGSGKARGRFQSGKTNKDRENSNTFNSMSGASTSGMRLKIKVGKGFNLYYPNVLVPESVYGLTSASNLGPGSGSQNLGSKNGDKLFEEGAMRKSESDKTKLYHAVVLNGQIPNNLESAALMEKSDGDAEEPCLVAPSNKLVDALIEPVNIKSMDPGTSPDSEVIDSIPDVQVGERHREDLNNTDFGFKEFNFAVHNSASKRRKKKDKPTCSRNSSVRDVSAGSPRKNKADYSENLGGKKNCTDVVSSVDLPSSADINTLSTSSSEDCGVHTEPLHLYGDIGLRDPTDVLEVKSSVEVEAHCSPDVNSEYSGSPGSEKFLPSERHLDSNLLKNLKSHNVSKTKSKASESKSRKKTACRHKLGRSVTKCCVKGNSVSDKVICETEDYLHEENDTEEIQKLDFGGKINADENKVSASLDMVPSAGSEEQHPSPRKAWVRCDDCYKWRRIPASLADVIEETNCAWTCKDGGDEAYADCSIAQEKSNAEINAELGLSYASSEEDNNGDRKNYKESEHQRPMSSQESTFTHISANEFLHRSRKTQTIDEIMVCHCKPPLKGQLGCGNECLNRLLNIECVQGACSCGDLCSNQQFQKRNYAKVKWFKCGKKGYGLKAIEDISAGKFLIEYVGEVLDMHAYEARQSEYALKSRRHFYFMTLNGSEVIDASARGNLGRFINHSCDPNCCTEKWMVNGEICIGLFALRDIKQDEEVTFDYNYVRIFGAAAKKCYCGSPHCRGYIGGDLLNAEIIVQDDSDEEFPEPVMLTEGDIEDGPGGHPEKENSLNPASSSSQRHRLIEVENSKGNLSSSLQMKVLSQQMDDVRRKPMPALQQGSAVESEHSDKTLIPNMGTSSSSVSKFKYKVIEDRCGLSEPHLLVKASQINGSVKKGKACANPTNNLKVGVTTNRMQVPSIKHKKAVEGSSNGRFEAVEEKLKELLDPDGGISKSKDATKGYLKLLLLTAASGDRSNGQAIQSNRDLSMILGALLETRSRAVLNDIIKKNGLRMLHNIMKQYRRDFKKIPILRKLLKVIERLAERKILTFEHVNCDPPCRGMESFRESMLSLTEHEDKEVHQIARSFRDRWIPRSLRKRDFINRDDCGVKSYRSFKRNRFSTSPNNTCEQSLRPTKAIDCAQPSLVETSSANAVAQEGCSAPYLNGCEISGQMRRKRKSRWDQPAETNSVVASHEHKKGKVVFGQNISEDVPPGFSCLFQPSGSSNASQNSGDLALQPPDHSGSGCPSDAVIGNPREKFNPRLPVSYGVPLPVIQQYGTPQVEKEGSWVTAPGMPFYPFPPPPPYLPQNDCQSCKSTDAMQIDQPAEIVRPDSSGFANRYSDDMAPSTTGLGAQDLSYEDNNHIPKPLKSSPDDLGRSFFRQQKWNKSKIPRPWSRRKFWGHDESNSMGGGSGNL 1951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1048 1065 - -
Alju08g0347 1951 SMART set_7 1144 1267 IPR001214 GO:0005515
Alju08g0347 1951 Pfam SET domain 1155 1261 IPR001214 GO:0005515
Alju08g0347 1951 MobiDBLite consensus disorder prediction 546 582 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1755 1773 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1042 1071 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 748 787 - -
Alju08g0347 1951 SUPERFAMILY SET domain 1071 1282 IPR046341 -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 881 904 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1376 1395 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1755 1782 - -
Alju08g0347 1951 Gene3D - 981 1039 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1311 1337 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 472 498 - -
Alju08g0347 1951 CDD SET_SETD2 1143 1285 IPR044437 GO:0010452|GO:0046975
Alju08g0347 1951 Coils Coil 350 370 - -
Alju08g0347 1951 ProSiteProfiles Post-SET domain profile. 1269 1285 IPR003616 -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1711 1731 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1932 1951 - -
Alju08g0347 1951 Pfam AWS domain 1106 1141 IPR006560 GO:0005634|GO:0042054
Alju08g0347 1951 SMART PostSET_3 1269 1285 IPR003616 -
Alju08g0347 1951 ProSiteProfiles SET domain profile. 1144 1261 IPR001214 GO:0005515
Alju08g0347 1951 ProSiteProfiles AWS domain profile. 1092 1142 IPR006560 GO:0005634|GO:0042054
Alju08g0347 1951 PANTHER SET DOMAIN PROTEINS 501 1723 - -
Alju08g0347 1951 SMART shorttest3 1092 1143 IPR006560 GO:0005634|GO:0042054
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1880 1912 - -
Alju08g0347 1951 Gene3D SET domain 1040 1295 IPR046341 -
Alju08g0347 1951 ProSiteProfiles Zinc finger CW-type profile. 978 1032 IPR011124 GO:0008270
Alju08g0347 1951 Pfam CW-type Zinc Finger 984 1030 IPR011124 GO:0008270
Alju08g0347 1951 FunFam Histone-lysine N-methyltransferase 1043 1299 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 1378 1395 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 273 293 - -
Alju08g0347 1951 MobiDBLite consensus disorder prediction 567 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0347 Alju-ChrAlju08 2510457 2523504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0347 1127 1284 C2H2 Transcription Factor Family AT2G23740 33.143 3.46e-20 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju08g0347 SET 1.6e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0347 08 2510457 2523504 Alju08g0347 08 2510457 2523504 ECH