Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0334 ATGGCATCGTCATCGAATTCACCATGTGCGGCTTGCAAGTTTCTTCGGCGAAAGTGCCAACCGGAGTGTGTGTTTGCACCCTACTTCCCGCCAGATCAACCGCAAAAATTCGCAAATGTTCACAAAGTATTTGGAGCGAGCAATGTCACCAAGCTCCTCAACGAATTACACCCCCACCAGCGTGAAGACGCCGTCAATTCTCTCGCCTACGAGGCCGACATGCGCCTCCGCGACCCCGTCTACGGCTGCGTCGGAGTCATCTCTCTCCTCCAACACCAACTCCGCCAGCTCCAAATGGACCTCACCTGCGCCAAGTCCGAGCTGTCCAGGTACCAGACCTTGGGCATCACCGGCCACAGCCTCATCGCCGCCCACCACCAGGCCCAAAACATGGGCATGAACCTGATCGGCGACCACCACTACCACCACCACCACCACCAGTTCTTCCCCCGGGACCACCATCAGTCCTCCATGATCAGGACATTTGATGCGGGTAACAACTATGACGGCGGTCTCCTGTCCATGAACGTCTCCACAAGCATAGGGCAGCTCAGCCAGTTTCAGCATCAGCAACCTAGAGCTGCTGCCGGCGACGATCGTCGGACTATTGATCCCTCTTAG 621 0.57 MASSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSRYQTLGITGHSLIAAHHQAQNMGMNLIGDHHYHHHHHQFFPRDHHQSSMIRTFDAGNNYDGGLLSMNVSTSIGQLSQFQHQQPRAAAGDDRRTIDPS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0334 206 MobiDBLite consensus disorder prediction 184 206 - -
Alju08g0334 206 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Alju08g0334 206 Coils Coil 87 114 - -
Alju08g0334 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 148 - -
Alju08g0334 206 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0334 Alju-ChrAlju08 2416781 2417401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0334 2 206 AS2 family AT1G65620 71.963 8.19e-95 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju08g0334 LOB 2.8e-43 No_clan