Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0332 ATGGAGACGATGCGACTTACGAAGCTTTGGTTATTGATTCCATTATTATTAGCAGCCGCTGCAGAAGCTCGATCCCTTGAAGGCTGCCTCAATAAATGTGGAGATGTGGAGATTCCATATCCTTTTGGTATTGGAGTGCAACCTCGTACTGGTCGCAGCTGCTTCTTGCAAGAATCTTTTGAGCTCACTTGCAATACCTCCACCTCCACATTATCCTACGGAGAGCACCCTGTTTCTAACATATCAGTCCAAGGTGGTCATCTTGACATTTCCATGTCCGTCTCCAAGGTTTGTTACAATCAACCTGGCGGCGCTATGCCTAACCCTCACTCTCTTGTAAACACTCCTTCTTTCGCCGTTTCCAGCACCCAAAACAAGTTCATAAGTGTTGGTTGCGACACTTTGGGCCTAATTGAATTCCAAAACAACCGTACTTCTTATGGTGGCTGCGTGACGCTGTGTGATGCACCTCCTCAACAAGATTTGAATGACAAAGCTTGTTCGGGAACTGGGTGTTGCCAGGTGGATATTCCTGTAGGAATGAGGAATATCACTGTTGTAGCATCTTCCGTCTTCAACCACTCGAACGTGTTGGATTTCAACAACTGTAGCTACGGTTTTGTTGCCAAACAGAGTTGGTTTAATTTCTCTGTTGATTATCTACGTGCCTTCCCCTTTGACATGGTTCCGCTTGTCCTAGATTGGACTGTTTCAGATCACACTTGTCATGCTGCTTCGACCAAGTCGGATTATGCCTGCACCGCTAATACTGATTGTGCCGACTCCGATGATGGATTCGGGTACAACTGCAAATGCAAACCCGGTTTTGATGGAAACCCGTACCATCCAGATGGATGTCACGACGTAGACGAATGCCAGGAATCGACCAACAATTGCATAAGTAAAGGAAATTGCCGTAACACGATTGGATCTTTTGAGTGTTTTTGCCCACCTGGCTACTCTGGGAATGGAACCACCGCCGGAGGATGCTACCCACCTTTGTCCAAAAATCCACTTACTATGGTCTTCACTGATCCAGAATACATGCAAACGAATCAGCTGACAGAGAAGAGTGATGTGTATAGTTTTGGGGTGATGGTCATAGAGCTGCTAACAGGGAAGAAAGCTGTGTCGTTTGAGAGGCCAGAAGAGGAAGTGAATCTGGCAATGCACTTCCTTACATACTTGAAACAGGGTCACGTACATGAAGTTCTTGAGGATGGAATAATGAATAATGAAAATAAGGAGAGGGTGAAAGAGGTGGCTATGCTGGCAGCAAGGTGTGTGAAATTAAGAGGAGAGGAGAGACCAAGCATGAAGGAAGTAGCAGCGGAATTGGAGGGAATAAAGATAATGGGGAATCAGTTAGGGGTGAAAGAAGAGCTGAATTTGGAGGAAGCTCAAACATTGCTGGGAGAGACATCCAAGTTTAGTGAATATGGAGATAGCATTGATCATGGAAAAAGAGCTTGGGATAGTATTACTGATCATGTTCTAATTGACTTTGACAGCGGTAGATGA 1521 0.4523 METMRLTKLWLLIPLLLAAAAEARSLEGCLNKCGDVEIPYPFGIGVQPRTGRSCFLQESFELTCNTSTSTLSYGEHPVSNISVQGGHLDISMSVSKVCYNQPGGAMPNPHSLVNTPSFAVSSTQNKFISVGCDTLGLIEFQNNRTSYGGCVTLCDAPPQQDLNDKACSGTGCCQVDIPVGMRNITVVASSVFNHSNVLDFNNCSYGFVAKQSWFNFSVDYLRAFPFDMVPLVLDWTVSDHTCHAASTKSDYACTANTDCADSDDGFGYNCKCKPGFDGNPYHPDGCHDVDECQESTNNCISKGNCRNTIGSFECFCPPGYSGNGTTAGGCYPPLSKNPLTMVFTDPEYMQTNQLTEKSDVYSFGVMVIELLTGKKAVSFERPEEEVNLAMHFLTYLKQGHVHEVLEDGIMNNENKERVKEVAMLAARCVKLRGEERPSMKEVAAELEGIKIMGNQLGVKEELNLEEAQTLLGETSKFSEYGDSIDHGKRAWDSITDHVLIDFDSGR 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0332 506 Gene3D Laminin 240 289 - -
Alju08g0332 506 SMART egf_5 241 287 IPR000742 -
Alju08g0332 506 SMART egf_5 291 331 IPR000742 -
Alju08g0332 506 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Alju08g0332 506 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 305 316 IPR000152 -
Alju08g0332 506 PANTHER OSJNBA0016N04.9 PROTEIN 9 307 - -
Alju08g0332 506 Pfam Wall-associated receptor kinase galacturonan-binding 29 86 IPR025287 GO:0030247
Alju08g0332 506 SMART egfca_6 288 331 IPR001881 GO:0005509
Alju08g0332 506 Pfam Protein tyrosine and serine/threonine kinase 337 446 IPR001245 GO:0004672|GO:0006468
Alju08g0332 506 SUPERFAMILY EGF/Laminin 288 323 - -
Alju08g0332 506 CDD EGF_CA 288 322 - -
Alju08g0332 506 SUPERFAMILY Protein kinase-like (PK-like) 338 444 IPR011009 -
Alju08g0332 506 ProSitePatterns Calcium-binding EGF-like domain signature. 288 314 IPR018097 GO:0005509
Alju08g0332 506 Gene3D Transferase(Phosphotransferase) domain 1 322 477 - -
Alju08g0332 506 FunFam Fibrillin 2 283 328 - -
Alju08g0332 506 Pfam Calcium-binding EGF domain 288 330 IPR001881 GO:0005509
Alju08g0332 506 Gene3D Laminin 290 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0332 Alju-ChrAlju08 2404736 2407192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0332 340 506 Receptor kinase-like Gene Family AT1G21230 40.719 1.09e-33 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Alju08g0332 PK_Tyr_Ser-Thr 1.5e-11 CL0016