Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0329 ATGGTTCAGGGCACTTATTTTGAGCCTCTTTCATCTTTTACTCCATGTGTCAATTCAGTTCAGAACTCAGCTTTACTCTTCTTCTGCCTTCGAGTTCTCTTTCAGTCAACAAATATAACAAAAAAAGGCATAGCGGCAACAGCAGGTGAACCTCAATTATCCCTGCAAGATTGCCCCGACAAATGTGGAGGTGTGGATATTCCATATCCATTTGGTGTTGGAGACAACTGCTCTCTGAATTCGCACTTCAATCTCACCTGTAACCACTCCACCTCCAAATTATATTACCGCAACTCAGACATCCAGGTCTTGAACATATCCCTCCATGATGCTCAAATGGACATCTCCATGTATGTCTCCCAGAATTGTTACGATGTCTTAGGAGAGAAGGTTCAAAACCACTCTTTTTCTGCCTCTCTCACTATTACAGCTTTCCCCATTTCTAGCTCCGCAAACAAGTTCGTGAGTGTGGGTTGTGACAGTTACGCCTACCTGAATAGTTTTCAGAACGGACAGAGTTATTCCACCGGCTGCTTATCGCAATGTAGCCAACCTCCCCCAAACATCACGGTTGGTGAAACCTGTTCCGGAATTGGGTGTTGCCAAGTCGATATTCCTCCTCGAATGACGAATATCAGTTTTAAATCATATAGCTTCCACAATCATACAAATGTGTGGGACTTCAACAACTGCAGCTATGCTTTTGTTGCCAAAACAGGCTCCTTTCATTTCTCTCCCGATCATCTTAAGCACCTGCCCTTTGAGGAGTTAACGCTCGTGCTAGATTGGTTTGTTGTAGATGAAGGTACTTGTCAAGAAGCTAATTCTGTGTGCAACCCCAAGGCCTACTGTAAGAACTCCGACAGTGGATCCGGATTCAGATGCTTTTGCAAGCCTGGGTTTTACGGAAATCCATACCATCCCCATGGATGTCAGGATGTTGATGAGTGCCTCACACCCAATCATTGTGATACCAAAGCGCATGCGGTGTGCAACAATTTCGATGGCGGCTACAACTGTTCTTGTCCACCTGGTTATACAGGCGATGGCTACGTTAATGGATCCCGCTGCACCTTGGACCCTCATAATCCTCCTTTGCTTTCTCTTATAATAGCACTAGGCGTTTGTGTAACCTTGTTAGTTGGCTTTACACTAGTCTCCACATTATGCTGGGCTCACAAGCAACAAACTCTGAAACAAATTAGGGAAAGAAATTTCGAGCAAAATGGAGGAAACATGCTGCTACAGACACTTTCACAACAACAAGGATATGCTGATAGAACCAAGATATTTACACAAAATGAGCTTCAAAATGCCACAAACAACTTTGATGAAGCTAAAATTCTTGGCCGTGGGGGACAAGGCACGGTTTACAAGGGTATATTACCCAACAACATAGTGGTTGCCATTAAGAAGTCAAGAGTAGGAGGGAATCCCAGACAAATTAAGGATTTTATCAATGAAGTGGTCGTACTTTCCCAAATCAACCATCGGAATGTGGTTAAACTTTTAGGGTGTTGTCTTGAAACCGAAGTTCCTCTGTTAGTTTATGAGTTTGTGGACAATGGCACCCTTCTTGACCACATTGACCCATCAAAGAATGAACACTCTATTTCATGGGAGACTAGATTAAGGATAGCTGCAGAAACTGCTGAGGCCATTTCGTATTTACACTCTGCAGCTTCTATTCCAATTTTTCATCGGGATATAAAATCTACCAACATGTTATTGGACCACAATCATAGAGCAAAAGTGTCCGACTTTGGAGCTTCAAGGCTTGTTCCTCTTGATGAAACTCAAGTTAGCACAGTGGTACAAGGGACACTTGGATACTTGGATCCAGAGTACCTCCACACAGGTCAGTTAAATGAGAAAAGTGATGTTTATAGTTTCGGAGTTGTACTTATAGAACTACTTACTGGAAATAAAGCAGTTGAATTCAATAGATCAGAACAACCAAATTTAGCTATCTACTTTGTGTCTTCAATGAAAGAAGACCGTTTATGGGAAATTCTTGATAGGCAACTGTTAGGTCAGAAGAAGAACGCTGAACAGTTGAAGGAAGTTGCTTTTCTGGCAAGACGGTGCGTTAGAGTTAACGGAGAGGAAAGACCAACTATGAAGGAAGTAGCAATGGAATTGGAGGGTTTGATTGCAATGGAAAGGCATCCTTGGGTGAAGAGTGGGGATGCTATGGCAGAAGAAACTGAATACTTACTTGTTCATGTGCCGGACGATGGGGTTGCCAGTACTAGCAATTCATCTGGATACGATACCATGAGAAAGCAGATCGCATTTGAGATTGCAGATGGGCGTTGA 2319 0.4291 MVQGTYFEPLSSFTPCVNSVQNSALLFFCLRVLFQSTNITKKGIAATAGEPQLSLQDCPDKCGGVDIPYPFGVGDNCSLNSHFNLTCNHSTSKLYYRNSDIQVLNISLHDAQMDISMYVSQNCYDVLGEKVQNHSFSASLTITAFPISSSANKFVSVGCDSYAYLNSFQNGQSYSTGCLSQCSQPPPNITVGETCSGIGCCQVDIPPRMTNISFKSYSFHNHTNVWDFNNCSYAFVAKTGSFHFSPDHLKHLPFEELTLVLDWFVVDEGTCQEANSVCNPKAYCKNSDSGSGFRCFCKPGFYGNPYHPHGCQDVDECLTPNHCDTKAHAVCNNFDGGYNCSCPPGYTGDGYVNGSRCTLDPHNPPLLSLIIALGVCVTLLVGFTLVSTLCWAHKQQTLKQIRERNFEQNGGNMLLQTLSQQQGYADRTKIFTQNELQNATNNFDEAKILGRGGQGTVYKGILPNNIVVAIKKSRVGGNPRQIKDFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVDNGTLLDHIDPSKNEHSISWETRLRIAAETAEAISYLHSAASIPIFHRDIKSTNMLLDHNHRAKVSDFGASRLVPLDETQVSTVVQGTLGYLDPEYLHTGQLNEKSDVYSFGVVLIELLTGNKAVEFNRSEQPNLAIYFVSSMKEDRLWEILDRQLLGQKKNAEQLKEVAFLARRCVRVNGEERPTMKEVAMELEGLIAMERHPWVKSGDAMAEETEYLLVHVPDDGVASTSNSSGYDTMRKQIAFEIADGR 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0329 772 Pfam Protein tyrosine and serine/threonine kinase 446 714 IPR001245 GO:0004672|GO:0006468
Alju08g0329 772 Gene3D Transferase(Phosphotransferase) domain 1 520 733 - -
Alju08g0329 772 SUPERFAMILY EGF/Laminin 312 351 - -
Alju08g0329 772 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 331 342 IPR000152 -
Alju08g0329 772 Gene3D Laminin 317 359 - -
Alju08g0329 772 FunFam Wall-associated receptor kinase 2 413 519 - -
Alju08g0329 772 CDD EGF_Lam 292 312 IPR002049 -
Alju08g0329 772 CDD EGF_CA 313 349 - -
Alju08g0329 772 Pfam Calcium-binding EGF domain 313 347 IPR001881 GO:0005509
Alju08g0329 772 SMART egfca_6 313 358 IPR001881 GO:0005509
Alju08g0329 772 SMART egfca_6 267 312 IPR001881 GO:0005509
Alju08g0329 772 FunFam Wall-associated receptor kinase 2 520 737 - -
Alju08g0329 772 ProSiteProfiles EGF-like domain profile. 313 358 IPR000742 -
Alju08g0329 772 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 52 717 IPR045274 GO:0007166
Alju08g0329 772 ProSiteProfiles EGF-like domain profile. 267 312 IPR000742 -
Alju08g0329 772 SUPERFAMILY Protein kinase-like (PK-like) 429 743 IPR011009 -
Alju08g0329 772 CDD STKc_IRAK 449 717 - -
Alju08g0329 772 ProSiteProfiles Protein kinase domain profile. 443 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0329 772 Gene3D Laminin 266 316 - -
Alju08g0329 772 Pfam Wall-associated receptor kinase galacturonan-binding 58 115 IPR025287 GO:0030247
Alju08g0329 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Alju08g0329 772 SMART egf_5 316 358 IPR000742 -
Alju08g0329 772 SMART egf_5 270 312 IPR000742 -
Alju08g0329 772 ProSitePatterns Calcium-binding EGF-like domain signature. 313 340 IPR018097 GO:0005509
Alju08g0329 772 SMART serkin_6 443 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0329 772 Gene3D Phosphorylase Kinase; domain 1 415 519 - -
Alju08g0329 772 FunFam Fibrillin 2 308 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0329 Alju-ChrAlju08 2372064 2375350 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0329 57 772 Receptor kinase-like Gene Family AT1G21230 44.918 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Alju08g0329 PK_Tyr_Ser-Thr 1.5e-46 CL0016