Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0325 ATGGCTAATAATGCTGCCGCCTGTGCAGAGAGGGCAACCAGTGACATGCTGATTGGCCCGGATTGGGCAATTAACATAGAATTGTGTGATATCATTAATATGGACCCTAGGCAAGCAAAGGATGCATTAAAGATACTCAAGAAGCGCTTGAGCAGTAAAAATCCCAAAATACAACTTCTGGCTCTTTTTGCATTGGAGACTCTCAGCAAAAATTGTGGTGAAAATTTGTTTCAGCAGATCATTGAGCGGGATATCTTACATGAAATGGTGAAGATAGTGAAGAAGAAGCCTGACTTAAATGTCAGGGAAAAGATACTGATTTTGATTGATATGTGGCAAGAAGCTTTTGGCGGTCCTAGTGGAAGGTTTCCCCAGTTCTATGCAGCATACAATGAACTAAGGTCTGCTGGAGTTGAATTTCCACCACGGGAAGAGAATAGGGCACCACTGTTCACTCCTCCTCAAACGCAGCCAATTGATTATCCTACTGCAGAATATGATGATGCTGCTATTCAAGCTTCTCTTCAGTCGGATGCTTCTGGCCTTAGCCTGCCCGAGATTCAAAATGCTCAAGGACTTGCTGATGTATTGATGGAAATGCTTAGTGCTTTGGATCCAAAAAATCCTGAGGCTGTGAAGGAAGAAGTAATTGTGGACCTTGTTGATCAATGCCGTTCTTGCCAAAAGCGGGTCATGCTTCTTGTGAACAATACTGCGGATGAGCAACTTTTGAGTGAGGGGTTGGCACTGAATGACAGCCTGCAACGTGTACTTGATCGACACGATGATATCCAGAAAGGAACTGTTAATTCAGGTGCAACTGCAAGAGGAACAGGGACCGCTGTTTGTCCACTTGTCAATGTAAGCCATGAGGATGATGAGTCAGAAGACGACTTTGATCAGTTAGCTCATAGGTCAAGAGATACTAATGCACTGGGTCGTAAACCAGCCAATGACAAGGCAGAAAGCGTGAGAGTCACCCAAATTCTTCCCCCACCACCACCATCAAGGAAGCCTGTGGCTTCTGATTCTGGCGTGGTTGACTATCTTAGTGGCGACACATACAAGGTAGACAACTCAGAACCAACCCCATTTTCGGTTCCATCTCATTGTAGCCCTCATGCTTCCTCGCCCCCTACTCATGGCATCAGTACGTCGCCACCAACTTTTACCAGACAACCGGTGTATGACGAACCATCGCCCCTGAGCAAATCTGCAGATCATCTTCCTCCAGCTCCCTGGGACACCCAATCTACTGGTGTACTTCCACCCCCACCGTCAAGGTATAACCAGAGACAACAGTTTTTTGAGCAGCAAGGTACATCTCATTCAAGCGGCGGATCCAATTCCTCTTATGATAGCTTGGTGGGACAAACGCAGAATTTTTCTTTGAATTCTTCTACCCCACCCAAACAAGAGAAGCCAGAAGATGCCCTTTTCAAAGATCTGGTTGACTTTGCTAAATCGAAGACTTCTTCGTCGTCTAAACCAAATAGGTCATACTAA 1506 0.4555 MANNAAACAERATSDMLIGPDWAINIELCDIINMDPRQAKDALKILKKRLSSKNPKIQLLALFALETLSKNCGENLFQQIIERDILHEMVKIVKKKPDLNVREKILILIDMWQEAFGGPSGRFPQFYAAYNELRSAGVEFPPREENRAPLFTPPQTQPIDYPTAEYDDAAIQASLQSDASGLSLPEIQNAQGLADVLMEMLSALDPKNPEAVKEEVIVDLVDQCRSCQKRVMLLVNNTADEQLLSEGLALNDSLQRVLDRHDDIQKGTVNSGATARGTGTAVCPLVNVSHEDDESEDDFDQLAHRSRDTNALGRKPANDKAESVRVTQILPPPPPSRKPVASDSGVVDYLSGDTYKVDNSEPTPFSVPSHCSPHASSPPTHGISTSPPTFTRQPVYDEPSPLSKSADHLPPAPWDTQSTGVLPPPPSRYNQRQQFFEQQGTSHSSGGSNSSYDSLVGQTQNFSLNSSTPPKQEKPEDALFKDLVDFAKSKTSSSSKPNRSY 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0325 501 Pfam VHS domain 9 130 IPR002014 GO:0035091|GO:0043130
Alju08g0325 501 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Alju08g0325 501 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Alju08g0325 501 Gene3D - 2 158 IPR008942 -
Alju08g0325 501 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Alju08g0325 501 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Alju08g0325 501 SUPERFAMILY GAT-like domain 145 267 - -
Alju08g0325 501 SUPERFAMILY ENTH/VHS domain 8 142 IPR008942 -
Alju08g0325 501 Gene3D - 175 273 IPR038425 -
Alju08g0325 501 MobiDBLite consensus disorder prediction 306 321 - -
Alju08g0325 501 CDD VHS 10 135 - -
Alju08g0325 501 MobiDBLite consensus disorder prediction 306 478 - -
Alju08g0325 501 FunFam TOM1-like protein 2 4 151 - -
Alju08g0325 501 CDD GAT_GGA-like_plant 186 264 - -
Alju08g0325 501 MobiDBLite consensus disorder prediction 421 472 - -
Alju08g0325 501 PIRSF TOM1 1 500 IPR014645 -
Alju08g0325 501 PANTHER TOM1-LIKE PROTEIN 1 497 IPR044836 GO:0035091|GO:0043130|GO:0043328
Alju08g0325 501 MobiDBLite consensus disorder prediction 356 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0325 Alju-ChrAlju08 2350273 2354769 Dispersed/Wgd