Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0317 ATGGATAGCCCTCCTCCAACGTCTTATGTCATCCTTGCATGTGATGCCACCAGAGATATCAGTGAGCATGAGATCAAGTCCATTCTTGATCACGTACGAAGTACCAGTGGCATTTTATATGCAGGTTGCAAATTGCTAGTGCTCGGCGTCTTGCATAAAGTGCCACACCCCATGGGGTACCAGACATTACCATGCCCTGAGTCTTTTGCTGGTACGAATTTTCGTGCAATGGATGAAGTAGCTGGCAAGAAACTTGATTCATATACAAATATGCTTTTGCCGATGTATGAAGATTGGGAAAATGCTGGGATCAGCATCGAAGTCAAAGTCACTGCAGGTTTTCCAATCAAACAGGTTATAATGCAAGAGGTTGCATGCTATAATGCAGCTTGGATTGTACTTGATAGGCACCTTCGACGGGACACAAAATACCTTCACAAGATACCAAGCAAGGTTGCATTGGTTAAAGAGGACTTGTTTTTGGATATCTGGAGATCTCACATACCACTTGAAACAGTAGATGTCACAGAAAGCAAGCTTGCTTATTCTTTGTCTAAATTTGTTTCTCTATCGGATTGTCGAAGTGTTGCAGACATTGGGCATTCTATTTCCTCTTCCAAAACCTGTCCCTCATCCATGGTTTCTTCTGACAACACAAAACACTCATTTGCATCACTCGAACAATTCTTCCCATCAGATCCTGGGTCGTCTTCTAGATCAGGTCCCCTTACTTCTCAGATTGTCCAAATTCAAAACAAATATGGTTTTATAAAAAAATCTTCAGATGCAGCAATTCTTTGTGATGGTTGTGGGATGAGGACTGAATTGTATGCTAAGGAGTCGATGAGTTTCAGCTATTCTGATATACAGAATGCAACAAATGATTTTTCAAAAGATAACTTATTGGGTGAAGGTGGTTATGGTCACGTGTACAAGGGTGTTCTTAGAGATGGACAGCAAATTGCTGCAAAGAATATAGTGATGCTGCTGGGTTACTGTTGCAAAGAAAGGCAAAATATTTTGGTATATGAATATATTTGCAACAAGTCACTTGACTGGCATTTATTCGATAAAGATGCTGCAGTTCTTGAGTGGCCTCAAAGATATGCTATTGCTATTGGAACTGCAAAAGGATTGTGCTTTCTCCATGAAGAATGTCGTGGGGGCCCCATTATTCATCGAGATATGCGACCTAGCAATATACTTCTTACTCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCCAAATGGAAGACTGGTAGCGATGAGACTATGCAAACAAGGATAGTGGGCACATCAGGGTGA 1311 0.4134 MDSPPPTSYVILACDATRDISEHEIKSILDHVRSTSGILYAGCKLLVLGVLHKVPHPMGYQTLPCPESFAGTNFRAMDEVAGKKLDSYTNMLLPMYEDWENAGISIEVKVTAGFPIKQVIMQEVACYNAAWIVLDRHLRRDTKYLHKIPSKVALVKEDLFLDIWRSHIPLETVDVTESKLAYSLSKFVSLSDCRSVADIGHSISSSKTCPSSMVSSDNTKHSFASLEQFFPSDPGSSSRSGPLTSQIVQIQNKYGFIKKSSDAAILCDGCGMRTELYAKESMSFSYSDIQNATNDFSKDNLLGEGGYGHVYKGVLRDGQQIAAKNIVMLLGYCCKERQNILVYEYICNKSLDWHLFDKDAAVLEWPQRYAIAIGTAKGLCFLHEECRGGPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGSDETMQTRIVGTSG 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0317 436 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Alju08g0317 436 Gene3D Transferase(Phosphotransferase) domain 1 323 436 - -
Alju08g0317 436 Gene3D Phosphorylase Kinase; domain 1 268 322 - -
Alju08g0317 436 SUPERFAMILY Protein kinase-like (PK-like) 281 435 IPR011009 -
Alju08g0317 436 ProSitePatterns Tyrosine protein kinases specific active-site signature. 391 403 IPR008266 GO:0004672|GO:0006468
Alju08g0317 436 ProSiteProfiles Protein kinase domain profile. 243 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0317 436 FunFam Os07g0541700 protein 346 434 - -
Alju08g0317 436 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 203 324 - -
Alju08g0317 436 Pfam Protein tyrosine and serine/threonine kinase 320 426 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0317 Alju-ChrAlju08 2317003 2319320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0317 229 436 Trihelix Transcription Factor Family AT1G23540 34.524 4.06e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju08g0317 PK_Tyr_Ser-Thr 1.6e-16 CL0016