Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0316 ATGAAACATAGTCTTTGTTTGTGTAGATACCTTGCTCCTGAGTATGCTGAAGATGGCGTTGTTTCTGTGAGGACTGATGTGTACGCTTATGGCGTTGTTCTGTTACAATTAATATCAGGACGCAAGGTGGGCATGTCCAGTAGTAATCCTGAACAACCATCCCTCCGTCAATGGGCTGAGCCATTGATTGAGAAGTTGGCTTTACAAGAACTCATTGACCCACGTCTTGGGGAGTCATATGACACATATGAACTTTACCTTATGGCAAAAGCTGCGTACTTCTGTGTGCAAAGAAGGCCTGAGATGCGACCATCGATGGCTGAGGTGGTTCGCCTTTTTGAAGGACAAAATGATCATTTCCATGCCATGGCAGATCAGTTCGTGCCTAATTACTATCAAGGGAGAGAAGGTTTGCATCCAAAGAGGGAGGATGAAACATGA 441 0.449 MKHSLCLCRYLAPEYAEDGVVSVRTDVYAYGVVLLQLISGRKVGMSSSNPEQPSLRQWAEPLIEKLALQELIDPRLGESYDTYELYLMAKAAYFCVQRRPEMRPSMAEVVRLFEGQNDHFHAMADQFVPNYYQGREGLHPKREDET 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0316 146 SUPERFAMILY Protein kinase-like (PK-like) 9 121 IPR011009 -
Alju08g0316 146 Pfam Protein tyrosine and serine/threonine kinase 6 111 IPR001245 GO:0004672|GO:0006468
Alju08g0316 146 Gene3D Transferase(Phosphotransferase) domain 1 1 131 - -
Alju08g0316 146 ProSiteProfiles Protein kinase domain profile. 1 124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0316 146 PANTHER OS08G0249100 PROTEIN 10 120 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0316 Alju-ChrAlju08 2316019 2316925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0316 10 114 Trihelix Transcription Factor Family AT5G38560 44.954 1.59e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju08g0316 PK_Tyr_Ser-Thr 1.7e-06 CL0016