Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0306 ATGTCATTAGTTGGATCTGCTGAGCTGGCTGCTACACCCTATAAAAATGCTGAACTCTATTCTCTAAAGGGAACTGATGCTCAGCCAGGGCTGTCCTCCCAAAGTTTTGATCCTGATAAGCAAAGAAGCATGTACATGACAGATTCTTGCTCCAGTGAGAGTTATGAGAAGTCCTTCCATGATTCACCATCTGAAGAACTGATAGAACCATCTAGTTCTGGGGTTTCAAGCAATTCATTTCGTCGGGATGATGCTTCTCCTTACCAGCCCATGGCTAGTTCAGGAGCTTCTATGGTTACTAATAACCCATTTGATACTTCTTTCATGTCCACGAGGCGTCATGATGCCTATTATCAAGCCAATTTTGGATCAGATTTGTCAGAAAATGAAAGCCTGGATGCACTTGACTTTAATGGTCAAATGAGATTAAAACTACAAGAATTAGAGAGGGCCCTGTTTGATGATGAGGAAGACATGTTTGAGACTGCTCAAAGCATGGAAATTGACCCTGAGTGGGCTGATCCCGTTAAAAACATGCAGCTCCATGACTCACCAAAGGAGTCTTCATCTTCAGATTCTAATCTCAGTAGCAACAAAGAAGTATCACATATCTCTCCTCGGACCCCAAGGCAATTGCTTCTTGAATGTGCAGGTGTACTTTCAGAAGGAAATTTAAAGGAGGCATCAGATATGATAAATAATCTCCGAAAGATGGTCTCAATTCAGGGAGATCCTCCCCAAAGAATTGCAGCCTATATGGTTGAAGGACTTGCAGCTCGCCTGGCCGAGTCCGGCAAGTGTATTTACAAAGCTCTGAAATGCAAGGAGCCTCCTTCTTCAGATCGTCTGGCAGCAATGCAGATATTATTTGAAGTGTGCCCATGTTTTAAATTTGGATTCATTGCTGCAAATGGGGCAATCACAGAGGCAGTGAAAGATGAAACCAAGGTGCACATAGTAGATTTTGACATCAACCAAGGAAGCCAATACATAACACTACTACAAACACTTGCTTCAAGGCCAGGCAAGCCACCCCACGTGAGATTGACTGGAGTTGATGATCCAGAATCTGTACAACGATCTGTTGGAGGCCTGAAGATCATAGGACAAAGACTTGAGAATCTAGCAGAAGCACTGAAGCTGCCATTCGAGTTTCGGGCCGTGCCATCAAGGACATCCCTTGTCACACCTTCAATGCTCAAACGTCGCCCTGGGGAAACACTTGTGGTGAACTTTGCATTTCAGCTGCACCACATGCCAGATGAGAGTGTTTCCACAGTGAACGAGAGAGATCAACTCCTTCGCATGGTTAAGAGCCTACAGCCAAAAGTAGTAACTGTTGTGGAACAAGATGTGAACACTAACACAACCCCTTTCTTCCCAAGATTCGTAGAGGCTTACAATTATTACTCTGCTGTTTTTCAGTCGCTTGATGCAACTCTTCCCAGAGAGAGTCAGGACAGGATGAATGTTGAGAGGCAATGCTTAGCAAGGGACATTGTCAACATTGTTGCATGTGATGGTGAGGATCGGATTGAAAGGTACGAAGTTGCAGGGAAATGGAGGGCAAGGATGGCAATGGCTGGATTCACTTCATACCCAGTGAGCAGTCACGTGACTGACTCAATTCGGAAACTCATCAGGCAGTATTGTGACATGTACAAGATGAAGGAGGAAATGGGTGCACTTCATTTTGGGTGGCAAGACAAGAACTTGATTGTAGCTTCGGCGTGGAGGTGA 1740 0.4471 MSLVGSAELAATPYKNAELYSLKGTDAQPGLSSQSFDPDKQRSMYMTDSCSSESYEKSFHDSPSEELIEPSSSGVSSNSFRRDDASPYQPMASSGASMVTNNPFDTSFMSTRRHDAYYQANFGSDLSENESLDALDFNGQMRLKLQELERALFDDEEDMFETAQSMEIDPEWADPVKNMQLHDSPKESSSSDSNLSSNKEVSHISPRTPRQLLLECAGVLSEGNLKEASDMINNLRKMVSIQGDPPQRIAAYMVEGLAARLAESGKCIYKALKCKEPPSSDRLAAMQILFEVCPCFKFGFIAANGAITEAVKDETKVHIVDFDINQGSQYITLLQTLASRPGKPPHVRLTGVDDPESVQRSVGGLKIIGQRLENLAEALKLPFEFRAVPSRTSLVTPSMLKRRPGETLVVNFAFQLHHMPDESVSTVNERDQLLRMVKSLQPKVVTVVEQDVNTNTTPFFPRFVEAYNYYSAVFQSLDATLPRESQDRMNVERQCLARDIVNIVACDGEDRIERYEVAGKWRARMAMAGFTSYPVSSHVTDSIRKLIRQYCDMYKMKEEMGALHFGWQDKNLIVASAWR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0306 579 ProSiteProfiles GRAS family profile. 200 579 IPR005202 -
Alju08g0306 579 MobiDBLite consensus disorder prediction 65 102 - -
Alju08g0306 579 MobiDBLite consensus disorder prediction 26 53 - -
Alju08g0306 579 Pfam GRAS domain family 210 579 IPR005202 -
Alju08g0306 579 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 180 575 IPR005202 -
Alju08g0306 579 MobiDBLite consensus disorder prediction 178 206 - -
Alju08g0306 579 MobiDBLite consensus disorder prediction 21 102 - -
Alju08g0306 579 MobiDBLite consensus disorder prediction 182 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0306 Alju-ChrAlju08 2235301 2237040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0306 1 579 GRAS Transcription Factor Family AT1G21450 63.203 0.0 723
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju08g0306 GRAS 4.6e-136 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2740 07 52874758 52876497 Alju08g0306 08 2235301 2237040 CCT
Alju08g0306 08 2235301 2237040 Alju08g0306 08 2235301 2237040 ECH