Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0305 ATGCCACGTAAAAGTGAGGGCGTGTGTGGCGACGATGATGACACCACTATTGATAAGCAATGCAGCACTTACTTTGATGTCTATGGCCCTCAAGGCAAGGCCGATGTTATTTTCAAGACACCCGAAGCTAATTCAACTTTGAATCTTCAGGACATTCAAGGACTGGTAACTTGGGTTCTTGCTGAAGGATTTATGCCGTCATGGGTTTTCATTAAGAACAAACCCCTTATTCAAAAAGTGGTTATGCTCTATACTCCAGGCCTGGATGCAGCTTTGTACTTGTCACAGTCTAGAGTGCTCCCCTTTTTAAAAAAAATCTGTGGCAATCCAAGGGCTGTCTTAGCTCTTAGCTGTGTTTCAGATGGAATGCAGACCATAGATGCACTCCTAACGTGCAAGCTGAAAAGAAAGAGGGATGAAAGTAGTTCAGTTATGGAGAAATCGGCCCTGATATCTCAGCAAGAAAAAAGCAGTGGTGTTATGGATAATAATATATCGTTTATGGAGCTTACAAAAGGCATTCCTTTCCCAGTTATGTATTATACTCTTACAGAGAAGGAATTAGAAGACAATGGATATTTATTTAAACAGCCAGGTTTTCTTTCTACTTTGCCTGCTCCTTTGGGATCTTCTCCCTGTGAAATGCTGGCGCTTGACTGTGAGATGTGCATCACAAATGAGGGTTTTGAACTTACAAGAATTACTCTAGTGGATTTTAATGGACAGGCCTTGCTTGATAAATTGGTTAAGCCATCAAATGCTATCATTGATTACAATACCAGGTATAGTGGTATAACACCTGAGATGTTAAATGGGGTCACCACCAATCTGAAAGACATTCAGGATGAATTTCTAAAGCTCGTTTACCAAGAGACTATTCTGGTTGGGCATTCTTTGGAAAATGATTTGTTAGCTCTGAAGATCTCTCATGATTTGGTAATTGATACAGCAGTATTATACAAATACCGACGAGGCGCATCTCATAAAACTGCTCTGCGGATTCTTGCCAAGAAATTTCTCTCTCAGGAAATACAGCAATCAGGGAACGGACATGACAGCATTGAAGATGCTAGAGCTGCAATGGAATTGGCACTATTAAAGATCAGACATGGACCGGATTTTGGTTCTCCCCCGTCTTTCATGCGGAAAAAGCTCTCTTCTATTTTGATTGAGTCTGGCAAAACTTCCTCTTTGGTGGATAATATATCTGTAGTAAAACGATATGCTTCTGCATCCTCCAATGCAATTCCAGTGGCTTCTGATGATGAAGCACTCGCAAGGATTACCAAGGAGGTGAAAAATGATAAGGTAAATTTTGTCTGGACACAGTTTTCGGAATTACATTCATACTTGAAGAAGCAGGCTGAGGATTCGGAGATCTTGAATAAAAGACTTGCAGAGATGATGTCATTGCTTACTTGTAAGAAGAATTCTGCTGAAGGTAAAGACATCAAGCTGAGAGCAACTTCTGAATTGAAGGAAATTCTTAGTCGCATGGATTCTAGAATTGAAGCTCTGTATAAGTCATTGCCATCTAATGCTATGTTGATCATTTGCACCGGTCATGGAGACACAGCAATTGTGCACAGACTTAGGAGAATGCTTTCGGAGCAGAGCGAAACCACCATATGTCGTGAGAAGATTGTGGAAATCCTAGAAGAGTTTCAGGCTCGAGCTGAGGTTGCCTTGTGTTTTTTAGGTGTGAAGCATTGA 1713 0.4092 MPRKSEGVCGDDDDTTIDKQCSTYFDVYGPQGKADVIFKTPEANSTLNLQDIQGLVTWVLAEGFMPSWVFIKNKPLIQKVVMLYTPGLDAALYLSQSRVLPFLKKICGNPRAVLALSCVSDGMQTIDALLTCKLKRKRDESSSVMEKSALISQQEKSSGVMDNNISFMELTKGIPFPVMYYTLTEKELEDNGYLFKQPGFLSTLPAPLGSSPCEMLALDCEMCITNEGFELTRITLVDFNGQALLDKLVKPSNAIIDYNTRYSGITPEMLNGVTTNLKDIQDEFLKLVYQETILVGHSLENDLLALKISHDLVIDTAVLYKYRRGASHKTALRILAKKFLSQEIQQSGNGHDSIEDARAAMELALLKIRHGPDFGSPPSFMRKKLSSILIESGKTSSLVDNISVVKRYASASSNAIPVASDDEALARITKEVKNDKVNFVWTQFSELHSYLKKQAEDSEILNKRLAEMMSLLTCKKNSAEGKDIKLRATSELKEILSRMDSRIEALYKSLPSNAMLIICTGHGDTAIVHRLRRMLSEQSETTICREKIVEILEEFQARAEVALCFLGVKH 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0305 570 Pfam Exonuclease 217 363 IPR013520 -
Alju08g0305 570 SUPERFAMILY Ribonuclease H-like 215 367 IPR012337 -
Alju08g0305 570 CDD REX1_like 216 365 IPR034922 -
Alju08g0305 570 Gene3D - 213 373 IPR036397 GO:0003676
Alju08g0305 570 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 53 383 IPR047021 GO:0004527
Alju08g0305 570 SMART exoiiiendus 214 373 IPR013520 -
Alju08g0305 570 FunFam RNA exonuclease NEF-sp 211 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0305 Alju-ChrAlju08 2228577 2234074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0305 215 363 C2H2 Transcription Factor Family AT3G27970 25.749 5.53e-06 47.0