Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0302 ATGGTACCCCCGGGACCACCCACTCCGATTGGTGGTGCCCAGTCTGTCTCACCCTCCCTCTTGAGATCTAATTCTGGAATGTTGGGAGCTCAAGGGGGTCCGATGCCTTCACAGTCTTCTTTTCCCTCGCTTGTGTCACCGCGGACCCCGTTTAACAACATGAACATGCTAGGAAATATGTCCAATGTATCTTCCATGCTGAATCAGTCTTTCCCAAACGGGGTTCCAAATTCTGCGCTCTCTGGTCCCGGAAGTAGCCAGCGAGCAGGTGTTGATGCTGGAGCTAAAACAGATCCTCTTTCCAGTGTTGGCAATGGAATGAGCTTCAATAATACCACATCCTCGTATGTACAATCAAATATGGCGAATCCTGGTCCATCTGGTCAAGGTCAGGCTCAACAATTTTCAAATCCTTCTGGCAACCAACTATTGCCAGATCAACAACATTCCCAACAACTTGACCCTCAAAATTTTCCACATAGTCAGCAGTCATTGCAACAGTTCCCAGGTCCTCTGAACTCTCAGCAACAACAGCAGCAGCAACATTTTCAATCAATTCGAGGAGGGATAGCTGGCATCGGACCTGTTAAATTGGAGCCCCAAGTAAACAATGAACAACTTGGGCAGCAGCAGCAGCAGATGCAATCATTGAGGAATCTTGCACCAGTGAAACTGGAACCTCAACAAATGCAAACAATGAGATCTATGCCACCAGTGAAAATGGAGCCCCAACATTCTGACCAGTCACTATTTTTACAGCAGCAGCAGCAGCAGCAACAACAACAATACCTCCACATGTCACGGCAACCCTCTCAGGCTGCTGCTGCTCAGCTTAATCTATTGCACCACCAGAGAATGTTGCAATTACAACAGCACCAACAACAACAACTCTTAAAGGCAATGCCTCATCAACGGCCACAAATACAACAACAGTTTCAACAGCAGAATATGCCTATAAGGACTCCCAAGCCAGTTTATGAACCTGGAATGTGTGCTAGGCGGCTGACGCAGTACATGTATCAGCAACAGCATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCTGAATATTTTGCTCCTAATGCGAAAAAGAAGTGGTGCGTTTCTATGTATGGAAGCGGCAGACATACAACTGGGGTTTTTCCTCAGGACGTATGGCACTGTGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAAGCAACTGTCGAGGTACTTCCCAGGCTCTTCAAAATAAAGTATGAAAGTGGCACTTTGGAAGAGCTACTTTATGTAGACATGCCTCGAGAGTATCATAATTCCTCTGGTCAGATTGTTCTGGATTATGCGAAAGCAATACAAGAAAGTGTTTTTGAGCAACTCCGTGTTGTTCGTGATGGTCAACTTCGAATAGTTTTTTCTCCAGACCTGAAGATATGCTCTTGGGAATTTTGTGCTCGGCGTCATGAGGAGCTTATCCCAAGAAGACTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGCTGCTCAAAAATACCAGGCTTTTACTCAGAATGCAACGCCTAATTTATCTGTTCCTGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCTCGTCAGCTAGCAAAAGCCCTAGAGGTGCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAGATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTACAGCCGAGAAAAAGAGATTGGACCTATGGAAAGCTTGGCCAAATATCCTCGGAGAACTAGCAGTTCATCTGGAGTTAATAGTCAAGCTCAACTGGCTGAAGATCAGTTACAGCAGCAACAGCAACAACAAATGGTGGCTCAAAACTCAAATGGTGATCAAAACTCGACGCAACCTGCTACTGTGCAAATGGCTTCTAGCAATGGGGTGGCTAGTGTAAATAACTGTATCAACTCAGTATCTGCATCAACTACCCCAAGCACCATTGTTGGGCTTCTCCATCAGAACTCCATGAATTCTAGACAACAGAATTCAATGAACAATGCCAGCAGTCCGTATGGTGGTAGTTCTGTTCAGATACCATCCCCAGGTTCTTCCAGTACCGTGCCGTCGGCACAGCCAAACCCGTCACCATTTCAAGCACCTACACCATCCTCATCTAGTAATCCACCACAAACTTCTCACTCATCTTTAGCAGCTGGCAATCACATGAATTCATCTAATTCACCAGCTAATGTTTCCTTGCAACAACAGCAGTCGTCCCTTTCTGGTGAAGCTGACCCCAGTGATGCTCAGAGTTCAGTTCAAAAAATCTTATCAGGGATATACACCCAAAATAATGGCACTGGTGGAATGGTAGGTGTCGGCTCTTTTGGAAATGATGTTAAGAATGTGAATGGGATTATGCCAGTGAGTACCAATATAGGTCTCAATAGTGGCAACTGCCTGCCTGGCAATGGGCCTGTGAATGGCAATTCAGGTGTTGGGGCTGGTGGATACGGTGCAATGGTTGGTCAATCTGCTATGGTCAATGGGATCAGAGCTGCAATGGGTAACAACTCTATTGTGAATGGGAGGGGGGGAATGGCATCTATTGCTCGAGACCAAGCTATGAATCATCAAGATTTGTCAAACCAACTACTTAGTGGACTAGGAGCAGTAAATAGTTTTAATAATCATCTTCAATTTGATTGGAAACCTTCCCCATGA 2715 0.449 MVPPGPPTPIGGAQSVSPSLLRSNSGMLGAQGGPMPSQSSFPSLVSPRTPFNNMNMLGNMSNVSSMLNQSFPNGVPNSALSGPGSSQRAGVDAGAKTDPLSSVGNGMSFNNTTSSYVQSNMANPGPSGQGQAQQFSNPSGNQLLPDQQHSQQLDPQNFPHSQQSLQQFPGPLNSQQQQQQQHFQSIRGGIAGIGPVKLEPQVNNEQLGQQQQQMQSLRNLAPVKLEPQQMQTMRSMPPVKMEPQHSDQSLFLQQQQQQQQQQYLHMSRQPSQAAAAQLNLLHHQRMLQLQQHQQQQLLKAMPHQRPQIQQQFQQQNMPIRTPKPVYEPGMCARRLTQYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRHTTGVFPQDVWHCEICNRKPGRGFEATVEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAAAQKYQAFTQNATPNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSREKEIGPMESLAKYPRRTSSSSGVNSQAQLAEDQLQQQQQQQMVAQNSNGDQNSTQPATVQMASSNGVASVNNCINSVSASTTPSTIVGLLHQNSMNSRQQNSMNNASSPYGGSSVQIPSPGSSSTVPSAQPNPSPFQAPTPSSSSNPPQTSHSSLAAGNHMNSSNSPANVSLQQQQSSLSGEADPSDAQSSVQKILSGIYTQNNGTGGMVGVGSFGNDVKNVNGIMPVSTNIGLNSGNCLPGNGPVNGNSGVGAGGYGAMVGQSAMVNGIRAAMGNNSIVNGRGGMASIARDQAMNHQDLSNQLLSGLGAVNSFNNHLQFDWKPSP 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0302 904 Pfam LIM-domain binding protein 334 588 IPR029005 -
Alju08g0302 904 MobiDBLite consensus disorder prediction 238 269 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 1 47 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 585 639 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 101 183 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 591 639 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 12 47 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 675 709 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 675 768 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 74 183 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 721 768 - -
Alju08g0302 904 MobiDBLite consensus disorder prediction 246 269 - -
Alju08g0302 904 Coils Coil 598 625 - -
Alju08g0302 904 PANTHER LIM DOMAIN-BINDING PROTEIN 209 892 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0302 Alju-ChrAlju08 2207317 2213548 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0302 1 900 C2H2 Transcription Factor Family AT1G43850 60.359 0.0 766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0302 08 2207317 2213548 Alju08g0302 08 2207317 2213548 ECH