Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0278 ATGGGAAACAGACTGGAATTGTTGTTCTTGTTCTCAACAGCCTTCACGATCGGAGCAATGTTCTTTCGTGTTGGAGCCGAGCCGGTGGAAGATAAGCAAGCTTTGCTTGACTTCCTTCACCGCATAAACCACTTTCATGCTCTAAACTGGAATGATGAGAAATCTTCTGTATGCAAAAGCTGGAGAGGAATCACCTGCGATAGAGACCATTCCAGAGTCATAGGCCTTCATTTACCTGCAGTTGGATTGAGAGGGCCAATACCACAGAACACCTTAAGTCGCCTCTCAGCACTTCAGACTGTGAATCTAACATCCAATAGCCTAACGGGTCCTTTTCCTTTTGGTTTCTCTGAGCTTAAGAATTTAACCTATCTGAACATTCAGTTCAACGAGTTTTCTGGCCCATTGCCATCAGATTTCTCAGTTTGGAAGAATTTGACTGTTGCTAATTTATCCAACAATTTTTTTAATGGGAGCATTCCTTCATCGATTTCGAGTCTGATTCATCTCACATCTTTAGTCCTGGAAAATAACTCGCTTTCCGGTGAAATTCCTGACATCAATATTCCTACCCTGCAAGAGCTGAATCTGGCCAACAATAACCTTAGTGGGATGGTGCCCAAATGCCTTCTGAGATTCCCAAGTTGGGCGTTTTCAGGGAACAATCTTTCATTGGCAAATGCTCAACCAAGAAAGAAAACCTCAAAAAGACTTGGTAAGTCTGCATTAATAGGTACAATTCTAGGTTGTAGTGGGCTTGCATTTGGAGTTACTGCAGCTTTCTTGCTTTTGTGCTACTACGATAAAGGAGGTGAAAATGGGCTAACAATGAAATCCCAGAAAAAAGACATGTTTCTGAAAAAGGATATATCTGAGAGTCATCACAGAAAAAACAAGATTGAGTTCTTTGAGGATTGCAATTTCGCATTTGACCTGGAGGATCTGTTGAGAGCATCAGCTGAGGTGCTTGGTAAGGGGACGTATGGCACAACATATAAGGCAAATATAGAGGACGCTACCACTGTGGTGGTGAAGAGATTGAAAGAAGTCATCATCGGAAAACGTGAGTTTGAACAGCAGATGGAGGTTGTTGGGAGGATTAGGCACGACAATGTGGCAGCTCTCAGGGCATATTACTATTCCAAGGAGGAGAAACTTATGATCTATGATTACTATGAACAAAGTAGCGTTTCTGCTATGTTGCATGGCAGAAGAGGGGAAGAAAGGATTTCATTAGATTGGGATAGCAGGCTAAGGATTGCAATAGGTGCAGCAAGAGGCATTGCTCACGTGCATGCTCAACAAGGAGGAAAACTTGTCCATGGAAACATAAAAGCCTCCAACATCTTCCTCAACTCGGAAGGTTATGGCTGTATATCTGACATTGGTTTAGCAACACTGATGAGTCCAATAGCGCCACCGTCACTAAGAACTGCTGGCTACCGTGCTCCAGAAATAACAGACCCCAGAAAAGCAAGCCACGCATCAGATGTCTACAGCTTTGGAGTGTTCCTGTTGGAGCTTTTGACCGGAAAAGGCCCCATGCACGCCACTGCAAGTGAGGAGGCCGTCCACTTGGTTAGGTGGGTGAATTCTGTGGTCAGAGAGGAATGGACAGCTGAAGTATTTGATGCACAGTTGCTGAGATTTCCAAATATAGAGGAAGAAATGGTACAAATGTTACAACTTGCGATGGCATGTGTTGCTAGAGTTCCAGAGCAGAGACCAAAAATGCAAGATGTTTTAAGAATGATGGAGGATATTCTTCGACCAAATACTGAGAATCGACTGTCATCTGAATCCAGATCAGCAGCTTCTACCCCGACACCACCGCCAATTGACGTACCTTCTTCCTCTGTGGATGCTTAG 1869 0.4382 MGNRLELLFLFSTAFTIGAMFFRVGAEPVEDKQALLDFLHRINHFHALNWNDEKSSVCKSWRGITCDRDHSRVIGLHLPAVGLRGPIPQNTLSRLSALQTVNLTSNSLTGPFPFGFSELKNLTYLNIQFNEFSGPLPSDFSVWKNLTVANLSNNFFNGSIPSSISSLIHLTSLVLENNSLSGEIPDINIPTLQELNLANNNLSGMVPKCLLRFPSWAFSGNNLSLANAQPRKKTSKRLGKSALIGTILGCSGLAFGVTAAFLLLCYYDKGGENGLTMKSQKKDMFLKKDISESHHRKNKIEFFEDCNFAFDLEDLLRASAEVLGKGTYGTTYKANIEDATTVVVKRLKEVIIGKREFEQQMEVVGRIRHDNVAALRAYYYSKEEKLMIYDYYEQSSVSAMLHGRRGEERISLDWDSRLRIAIGAARGIAHVHAQQGGKLVHGNIKASNIFLNSEGYGCISDIGLATLMSPIAPPSLRTAGYRAPEITDPRKASHASDVYSFGVFLLELLTGKGPMHATASEEAVHLVRWVNSVVREEWTAEVFDAQLLRFPNIEEEMVQMLQLAMACVARVPEQRPKMQDVLRMMEDILRPNTENRLSSESRSAASTPTPPPIDVPSSSVDA 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0278 622 Pfam Leucine Rich Repeat 192 219 IPR001611 GO:0005515
Alju08g0278 622 MobiDBLite consensus disorder prediction 591 622 - -
Alju08g0278 622 SUPERFAMILY Protein kinase-like (PK-like) 321 600 IPR011009 -
Alju08g0278 622 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 392 599 - -
Alju08g0278 622 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Alju08g0278 622 Gene3D Phosphorylase Kinase; domain 1 283 391 - -
Alju08g0278 622 FunFam Probable inactive receptor kinase RLK902 28 188 - -
Alju08g0278 622 Gene3D Ribonuclease Inhibitor 29 239 IPR032675 -
Alju08g0278 622 PANTHER OS05G0588300 PROTEIN 14 600 - -
Alju08g0278 622 MobiDBLite consensus disorder prediction 592 608 - -
Alju08g0278 622 Gene3D Transferase(Phosphotransferase) domain 1 393 607 - -
Alju08g0278 622 ProSitePatterns Protein kinases ATP-binding region signature. 323 354 IPR017441 GO:0005524
Alju08g0278 622 SUPERFAMILY L domain-like 32 215 - -
Alju08g0278 622 Pfam Protein kinase domain 320 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0278 622 ProSiteProfiles Protein kinase domain profile. 317 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0278 622 FunFam pollen receptor-like kinase 1 286 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0278 Alju-ChrAlju08 2039596 2042178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0278 20 613 Receptor kinase-like Gene Family AT4G23740 54.575 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju08g0278 Pkinase 1.6e-32 CL0016