Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0271 ATGGCAGATTCCGGTGCACATAACCTCATCAACGAACTGCTTCAGGGCAGGGACCTCGCAAGACGCCTTCAAATATGTCTGAATGACCCCTCCACCTCCCCACAAACCCTTGACGTGTTGATCCGTGCCATCATCGCTGCATTCGAGCAGGCCCTCGCTCTGCTCAACCCCGCCGCCCCGCCGCCCGACTCTCCGCCTTTCACTCCTACCAGCCCTGACTCCCACAATAAGCATTTCCAGCTCCAACACCAAAACACGTCGGCAAGATGGACCAAACAGATTAGAATTAGCCCCGGCATGGCCGTTGAGTCCCTTCTCGACGACGGTTTTAGCTGGAGGAAGTATGGCCAGAAAGACATTCTTGGAGCCAAATTCCCAAGAGGATACTATAGATGTACCCATAGACATGCACAAGGATGCTTGGCCACAAAGCAAGTGCAACGATCCGACCAAGACCCAACGGTCATGGAAATCAATTACAGGGGAAACCACACCTGCAAACTCGCCTCCAGCCCTGCTCCTCCCTCACAAGAACAGGTCGTGAATCTCCGTTCAGGCCTAAGGGTGCTGACGGATAATTTAAATGCCTCTGATCAAACCTCTTTTGCTTCATTCCAATTGCCTTCAACTTCCAACGTCACACCCGACAACCTCGACTCCTTGTTGTGTCCTGCCATCCAAAACAATAATGTTGTTGAGAAATTTAGTTCTCCTCCACACATGTCCCCTGCCACCTCTGCAACAGCCCACTTTTCGGCGTCGCCTAGAGGGGTTAGTAGCTCTGGAGGGCCCCTAAATTTGCCTGCTTCCACCTCTCACATGAACGACTCCATCTCTCCGGCAAGTGCTCCCACCGGCGAGTTTCCATTTGACCACTTCGAATTTGAAGGCCCCAGCTTCACATTTCATGACCCACGATTCTTTTAA 927 0.5221 MADSGAHNLINELLQGRDLARRLQICLNDPSTSPQTLDVLIRAIIAAFEQALALLNPAAPPPDSPPFTPTSPDSHNKHFQLQHQNTSARWTKQIRISPGMAVESLLDDGFSWRKYGQKDILGAKFPRGYYRCTHRHAQGCLATKQVQRSDQDPTVMEINYRGNHTCKLASSPAPPSQEQVVNLRSGLRVLTDNLNASDQTSFASFQLPSTSNVTPDNLDSLLCPAIQNNNVVEKFSSPPHMSPATSATAHFSASPRGVSSSGGPLNLPASTSHMNDSISPASAPTGEFPFDHFEFEGPSFTFHDPRFF 308
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0271 308 ProSiteProfiles WRKY domain profile. 101 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0271 308 FunFam WRKY transcription factor 53 92 169 - -
Alju08g0271 308 MobiDBLite consensus disorder prediction 237 275 - -
Alju08g0271 308 Gene3D WRKY domain 98 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g0271 308 Pfam WRKY DNA -binding domain 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0271 308 MobiDBLite consensus disorder prediction 57 80 - -
Alju08g0271 308 SUPERFAMILY WRKY DNA-binding domain 104 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g0271 308 SMART WRKY_cls 106 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g0271 308 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 242 IPR044810 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g0271 Alju-ChrAlju08 1978113 1979217 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0271 8 171 WRKY Transcription Factor Family AT5G24110 45.238 1.89e-45 154
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju08g0271 WRKY 4.6e-26 CL0274