Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0265 ATGGAGTGCAACAAAGATGAGGCGTGTAGGGCCAAAGAACTAGCAGAAAGGAAATTTTCTGAAAGGGAATATACTGGTGCAAAGAAGCTTGCTCTCAAGGCTCTAAATCTGTGTCCTACACTGGAGGGTATCTCTCAGTTTTTGAATACTCTTGATGTTTATATCTCTGCCGAGAATAGAGCAAGTGGAGAAATGGATTGGTATGGTATACTTAAAGTGAACCCCTGCGCAGATGAGGAAACAGTTAGACAACATTACAGAAAGCTGGCTCTTACTCTTCACCCTGACACAAATAAGTCTTTAGGTGCAGAAGGTGCCTTTAAGCTGGTTTTAGAGGCGTGGAGTATGTTATCAGATAAGGACAAGAGACAAGCATATAACCAGAACAGGAGTTTGAAAGAATTTCAACATAATGCTCCCAACCATGTCAAGTCTCAGTCAGAAGCTCCATGTTCAAATGTTTTTAATAATCTCAACAAGAACGTGACTACAAATGTGAGGAATGGAAATCATAACACTCGATTACGACCCACATCAGTTCCTCCTTCACAAAAAAAGGCTAGGACCTTTTGGACAATCTGTAACCGGTGCAAGACACATTATGAATATCTCAAGATCTATTTGAATCATACCCTTATTTGTCCCACCTGTAACGAGCATTTCTTGGCTGTAGATATGCCTCCGCCTCCCAATATTTTCAAGTCAGCAAATCGTTCTTCTAGCCAACAGCGTGAGAATTCTCAACAACATGCTGCAGGGAATAATACAGGAAGAAATTATGCAGTTTCTCAAAATATAGGAGCAGGAGATTCCTCTGGCAGATTGTTTGACAACACAAGCTCTCAGTGGGGTCCTCAGTCCAAAAATGCTGAAGGTTCCTTTAATAAGGTAGAAAAGACATTGAAGAAGAGGAGGACAGATGAGATTCACAATAATGGTGATCCAGGATACATGACTAATCATATGGCCATGGGACATGGGGTTGCAGGATTTGGTCATGTTTCTGAATCAGGAAAGGTTAACTGGCAAACAGAAAGGACCTCTGGGTTTTCTGGTATTACCAGCAAGCCCCACAGCATGAGAGAATTAGGAATGGTTGAAATACGGAACATGTTGATGCATAAGGCTCGAAGTGACCTTTGTAAGAAAGTTCAAGAATGGAGATCAATAGCTGAAGGTAAGAATGCCAAGAAGCACAAACAGAACAAGAGAACCAAAAGCACATTGAATGGCAGAAAACCTGATGTGGAGAAGCATGATGAGTCCGCTTTTAATGGTAACGGGCATCTGGACAGCAATTCAATTGAGGTGGACCAAGCCTGTGTAACAATCAAAGTTCCAGACTCAGATTTTCACAATTTTGACTTGGATAGATCTGAAAGTTCTTTTGAGGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGGATGCCTCGGTATTATGCTCGAATCTACAAGGTGATCTCGTTGAAGCCATTTAAGATGCGGATCAGTTGGCTTAACTCTCGCAGCAATAGTGAACTGGGTCCAATAGATTGGGTGGGTTCGGGTTTTTACAAAACTTGTGGGGATTTCAGAACTGGCAAGCATGAAATAACCGAATCATTAAATTCATTTTCACACAAGGTTAAGTGGACAAAAGGCACCAGAGGAATTGTTCGCATTTTTCCTGGAAAGGGGGAAGTTTGGGCTCTTTATAGAAACTGGTCTCCAGATTGGAACCAACATACTCCAAATGAAGTGATACACAAGTATGACTTGGTAGAGGTGGTTGAAGATTTTGATGAAGATCAAGGTGTAGTAGTTGCCCCGCTTATTAAGGTTGCTGGATTTAGGACCGTGTTTGATAGGCACGGAGATCCTCATGGGTTAAGGAGGATACCTAAAGACGAGCTGTTTCGTTTCTCTCATCAGGTTCCCTACTACTTGCTTACTGGACAAGAAGCTGATAATGCCCCAAAAGGTTGTCGAGAGTTGGATCCAGCAGCTACTTCTCTCGACCTCCTGCAGAATATAACAGAAGCAAGCGACGAGGCGCCCGATGATGCTGGCAAACGTAGGCAAGACACATTGCTCAGTTCAACCGAAAAGTGTGGTCTGGAGATGCAGGAATGA 2118 0.4273 MECNKDEACRAKELAERKFSEREYTGAKKLALKALNLCPTLEGISQFLNTLDVYISAENRASGEMDWYGILKVNPCADEETVRQHYRKLALTLHPDTNKSLGAEGAFKLVLEAWSMLSDKDKRQAYNQNRSLKEFQHNAPNHVKSQSEAPCSNVFNNLNKNVTTNVRNGNHNTRLRPTSVPPSQKKARTFWTICNRCKTHYEYLKIYLNHTLICPTCNEHFLAVDMPPPPNIFKSANRSSSQQRENSQQHAAGNNTGRNYAVSQNIGAGDSSGRLFDNTSSQWGPQSKNAEGSFNKVEKTLKKRRTDEIHNNGDPGYMTNHMAMGHGVAGFGHVSESGKVNWQTERTSGFSGITSKPHSMRELGMVEIRNMLMHKARSDLCKKVQEWRSIAEGKNAKKHKQNKRTKSTLNGRKPDVEKHDESAFNGNGHLDSNSIEVDQACVTIKVPDSDFHNFDLDRSESSFEEDQVWAAYDDDDGMPRYYARIYKVISLKPFKMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEITESLNSFSHKVKWTKGTRGIVRIFPGKGEVWALYRNWSPDWNQHTPNEVIHKYDLVEVVEDFDEDQGVVVAPLIKVAGFRTVFDRHGDPHGLRRIPKDELFRFSHQVPYYLLTGQEADNAPKGCRELDPAATSLDLLQNITEASDEAPDDAGKRRQDTLLSSTEKCGLEMQE 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0265 705 MobiDBLite consensus disorder prediction 675 705 - -
Alju08g0265 705 MobiDBLite consensus disorder prediction 408 425 - -
Alju08g0265 705 Pfam Domain of unknown function (DUF3444) 443 649 IPR024593 -
Alju08g0265 705 PANTHER BNAC03G44070D PROTEIN 1 665 - -
Alju08g0265 705 PRINTS DnaJ domain signature 86 101 IPR001623 -
Alju08g0265 705 PRINTS DnaJ domain signature 102 122 IPR001623 -
Alju08g0265 705 PRINTS DnaJ domain signature 68 86 IPR001623 -
Alju08g0265 705 MobiDBLite consensus disorder prediction 391 429 - -
Alju08g0265 705 SUPERFAMILY Chaperone J-domain 60 129 IPR036869 -
Alju08g0265 705 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Alju08g0265 705 Gene3D DnaJ domain 63 170 IPR036869 -
Alju08g0265 705 MobiDBLite consensus disorder prediction 232 295 - -
Alju08g0265 705 MobiDBLite consensus disorder prediction 679 693 - -
Alju08g0265 705 Pfam DnaJ domain 66 127 IPR001623 -
Alju08g0265 705 MobiDBLite consensus disorder prediction 233 294 - -
Alju08g0265 705 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Alju08g0265 705 CDD DnaJ 66 119 IPR001623 -
Alju08g0265 705 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0265 Alju-ChrAlju08 1926345 1928462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0265 4 233 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.237 1.00e-27 113