Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0261 ATGCGGTATCCCAAATATTGCTGGTTGCTGTTGTTGATCGCGGTATTGCTGGAACTTACAAACAAGGGGTTGTGCCGTACTGAGGAGTGCCGAGAATCAAGATGCGGACGTCATGGCCCTTCGATTAGGTTTCCGTTCCGACGTAATTACATCGATCCCGATCACTGCGGCTATCCTGGGTTTAATCTCACTTGTCATGAACATCACACACTGCTTGAGCTTCCTGCAGTTCCACTTCCGATTCAATTCAGGGTCACTGATATAGATTACAACTATCAGACTGTGTTCATATCTGACCTAGAAAATTGCCTTCCGAAACAGCTTCTGAAGCTCAACCAATCCTCAATTTCTCCTTTCCAATTTACATCGTCTCCACTTGAATTAAATCCATCCGAGACCTATCTTTTCAGTTGTCCTCCAAATGAATTCTCCTGCCCGTACGTCGCACTCAGAGCCTCTGCTTCGCCCACACTCCTTGATTCGGGCCTAATATCCTGCACCCGGATGTTTAACACAATTTCATCAGTCTCTTGGAGCTCCGACCCAAATGTTTGGACGTTACGATGGTTTAAACCAAATTGTAGTGAGTGCGAAGCTAGGGGCAAATTATGTAAATTGAACAACAACGGTACTAAAGATGCCATCCAATGCTATGAACCCCCGCCCAAACCTGTCAGTAAGATACATTACGCTGCTATAGGCCTGCCTGTTGGTTCAGCTGCTCTGGTGCTGGTTTTCTTTGCATTTTTTAAAATCTACCACTATTTTAGAATCAAAGGAGAGGATCTAGCAAGAGTGGAGAAGTTTTTACAGGATTATAGGGCATTCAGACCCACTAGATTCTCTTATGCTGATATTTATAGAATCACGAATCATTTGAAGGATAAGTTAGGCGAAGGAACTCATGGAGCAGTGTTCAAGGGTGAAGTCTCTAAGGAAATTTCAGTTGCTGTAAAGATACTCAATAGCATGGAGGGAGATGGAACTGAGTTCATTAACGAGGTAGGAACCATGGCAAAAATTCATCATGTCAATGTGGCCCGCATGCTTGGTTTTTGTGCCGATGGATTACATGGTGCTCTTGTTTATGATTTCTTCCCCAATGGTTCGTTACGAAACTACATTAATCCACCAGATAACGAGAACTTCCTTGGCTGGGAGAGGCTACATCACATTGCTCTTGGAATAGCTAAAGGGGTTGAGCAGAGTCGTGCAAGGCATCTATTTTCTGCCCTCAAAATTGAGATTGTAGAGCTGAGGCGGAGGCTGTTGGAGTAG 1278 0.4429 MRYPKYCWLLLLIAVLLELTNKGLCRTEECRESRCGRHGPSIRFPFRRNYIDPDHCGYPGFNLTCHEHHTLLELPAVPLPIQFRVTDIDYNYQTVFISDLENCLPKQLLKLNQSSISPFQFTSSPLELNPSETYLFSCPPNEFSCPYVALRASASPTLLDSGLISCTRMFNTISSVSWSSDPNVWTLRWFKPNCSECEARGKLCKLNNNGTKDAIQCYEPPPKPVSKIHYAAIGLPVGSAALVLVFFAFFKIYHYFRIKGEDLARVEKFLQDYRAFRPTRFSYADIYRITNHLKDKLGEGTHGAVFKGEVSKEISVAVKILNSMEGDGTEFINEVGTMAKIHHVNVARMLGFCADGLHGALVYDFFPNGSLRNYINPPDNENFLGWERLHHIALGIAKGVEQSRARHLFSALKIEIVELRRRLLE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0261 425 Pfam Wall-associated receptor kinase galacturonan-binding 30 99 IPR025287 GO:0030247
Alju08g0261 425 PANTHER OS07G0415500 PROTEIN 92 401 - -
Alju08g0261 425 Pfam Protein tyrosine and serine/threonine kinase 293 401 IPR001245 GO:0004672|GO:0006468
Alju08g0261 425 SUPERFAMILY Protein kinase-like (PK-like) 273 401 IPR011009 -
Alju08g0261 425 SMART tyrkin_6 291 423 IPR020635 GO:0004713|GO:0006468
Alju08g0261 425 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Alju08g0261 425 Gene3D Transferase(Phosphotransferase) domain 1 277 402 - -
Alju08g0261 425 ProSiteProfiles Protein kinase domain profile. 291 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0261 Alju-ChrAlju08 1903591 1905760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0261 6 401 Receptor kinase-like Gene Family AT1G66910 24.835 7.95e-32 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Alju08g0261 PK_Tyr_Ser-Thr 1.9e-17 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0261 08 1903591 1905760 Alju08g0261 08 1903591 1905760 ECH