Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0254 ATGTATGCGGACACTGGTCTTTTGTTCCCATATTTCCAGAATTTATCTCAGGAGCTTCAACAACTCGATGAGTACTGTGAAACCCATAAGCCCAATGCTCCAATGAGTGATCTTGCGCAGTCTTCAGCCATGTCGGAGTATTTTGATTTGGCAGCAGAAGGAGACCTTTTCAAAGCTCCTGAACCTATAATTGAAGAACTAGTCATGGACTTGGATCCCATGACCACAACCATTTCAATGATTTCTTGTGGGGAAGATGTTGTCTCCTCACAAGGACTAAAACCCTCTGACTCTCTTCAACATGAACAACTCCTGAGCGATGTTTTTTATGGATGCAAGAAAGATATGCTGGAAAAGGAAGCAATTGAGTCGCCTCTATGTGAGATTCTGGAAACCAAGGTTCCTGCTTCGAATACAGATGAAATCCAAATTCAAGAAAGCAAACCATCTCCTGGCTCGCCATTACCAAAAAGTGTGAGTTCAGGATGTTTGAGCTCAGTGGAGTGGATGCAAGGAACTGCAATGAAGTCTGCTTTTATTGATTTCCCAGGAATTAATTTCTGTGCAGATTATGGCATGCGGAGGGCATTCAGCGAAGGAGATATAAAGGCTCTTGGCAGTGGTAATATGCATGTTATCCAATCTCCCTCAGAAAGGCCCTTTCCTATCAGTAACTGTACCAGTGAGGAACGCCGAGAAAAGCTCTCCAGATACAGGAGTAAGAAGACAAGGAGAAATTTTGGCCGGAAAATCAAGTATGCTTGCAGGAAGGCTCTTGCTGACAGCCAACCAAGAATCCGTGGAAGATTTGCCAAGACTGAAGAATTTGACACCAGGAGGCAATGCTAG 849 0.4393 MYADTGLLFPYFQNLSQELQQLDEYCETHKPNAPMSDLAQSSAMSEYFDLAAEGDLFKAPEPIIEELVMDLDPMTTTISMISCGEDVVSSQGLKPSDSLQHEQLLSDVFYGCKKDMLEKEAIESPLCEILETKVPASNTDEIQIQESKPSPGSPLPKSVSSGCLSSVEWMQGTAMKSAFIDFPGINFCADYGMRRAFSEGDIKALGSGNMHVIQSPSERPFPISNCTSEERREKLSRYRSKKTRRNFGRKIKYACRKALADSQPRIRGRFAKTEEFDTRRQC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0254 282 MobiDBLite consensus disorder prediction 140 159 - -
Alju08g0254 282 ProSiteProfiles CCT domain profile. 231 273 IPR010402 GO:0005515
Alju08g0254 282 Pfam CCT motif 231 273 IPR010402 GO:0005515
Alju08g0254 282 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 139 273 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0254 Alju-ChrAlju08 1844336 1846933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0254 217 272 C2C2-CO-like Transcription Factor Family AT5G24930 48.214 1.40e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju08g0254 CCT 5.4e-17 CL0281