Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju08g0247 | ATGATTTTGATTACTGGTTATTTCATATATCCATCACTTGTGGGAGGTTTCGGTGACTGGATGGACTTGGATAACATTGAGTGTGTGTCATCCTCGGACGGTATTGATGAAGACGAGATCCGCCATCATGGTATACATCCCCACCCCCATCATCACTCTGAGTTTTCATCCTCGAAGCCTCGCAATGGCGCCACCAATATGGGCCCCACGGCCATTACTCCGGCAACCAGCGTCCACGAGTTGCTGGAATGCCCTGTCTGTACCAATTCTATGTACCCACCAATTCATCAGTGTCACAATGGGCACACCTTATGCTCAACATGTAAAACAAGGGTTCACAACCGATGCCCCACTTGCAGACAAGAGCTTGGGGATATTAGATGTTTGGCTCTGGAGAAGGTAGCTGAATCACTTGAGTTACCATGCAAATACTATTCCCTTGGATGTCCAGAAATCTTTCCATACTACAGCAAGCTCAAGCATGAGGCAGTGTGCAGTTTTAGACCATACAATTGTCCTTATGCTGGATCAGAGTGTTCAGTTGTTGGGGACATCCCTTTCCTCGTTTCACATCTGAGGGATGATCATAAGGTGGACATGCACACAGGATGCACATTCAACCATCGTTATGTGAAGTCAAATCCCCGTGAAGTAGAGAATGCAACTTGGATGCTCACTGTATTTCATTGTTTTGGGCAATACTTCTGCCTTCATTTTGAAGCCTTCCAGCTAGGGATGGCACCTGTTTACATGGCATTCCTTCGTTTCATGGGAGACGAGAATGAGGCTCGAAACTATAGCTATAGCCTAGAAGTTGGGGCGAATGGCCGGAAACTGATTTGGGAGGGTACTCCAAGAAGTGTCCGGGATAGCCATCGTAAGGTCAGGGATAGTCACGACGGCCTTATCATCCAACGAAATATGGCCCTTTTTTTCTCTGGAGGGGACAGGAAGGAGCTTAAGCTTAGAGTTACGGGAAGAATATGGAAAGAACAACAGAATCCGGATGCAGGGGTGTGCATACCAAATCTCTGTAGCTGA | 1041 | 0.4697 | MILITGYFIYPSLVGGFGDWMDLDNIECVSSSDGIDEDEIRHHGIHPHPHHHSEFSSSKPRNGATNMGPTAITPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYSKLKHEAVCSFRPYNCPYAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPDAGVCIPNLCS | 346 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju08g0247 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 31 | 135 | - | - | |
Alju08g0247 | 346 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 191 | 325 | IPR008974 | GO:0005515 | |
Alju08g0247 | 346 | SUPERFAMILY | RING/U-box | 73 | 126 | - | - | |
Alju08g0247 | 346 | MobiDBLite | consensus disorder prediction | 45 | 66 | - | - | |
Alju08g0247 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT5-like | 193 | 325 | - | - | |
Alju08g0247 | 346 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 50 | 136 | IPR013083 | - | |
Alju08g0247 | 346 | ProSiteProfiles | Zinc finger SIAH-type profile. | 137 | 197 | IPR013010 | GO:0008270 | |
Alju08g0247 | 346 | PANTHER | E3 UBIQUITIN PROTEIN LIGASE SIAH | 63 | 331 | - | - | |
Alju08g0247 | 346 | SUPERFAMILY | TRAF domain-like | 137 | 329 | - | - | |
Alju08g0247 | 346 | Pfam | Seven in absentia protein family | 126 | 325 | IPR018121 | GO:0005737|GO:0006511|GO:0007275 | |
Alju08g0247 | 346 | CDD | RING-HC_SIAHs | 82 | 120 | - | - | |
Alju08g0247 | 346 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 137 | 190 | IPR013083 | - | |
Alju08g0247 | 346 | CDD | Sina | 198 | 326 | - | - | |
Alju08g0247 | 346 | FunFam | E3 ubiquitin-protein ligase SINAT3 | 136 | 192 | - | - | |
Alju08g0247 | 346 | ProSiteProfiles | Zinc finger RING-type profile. | 84 | 120 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju08g0247 | Alju-ChrAlju08 | 1770728 | 1773675 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju08g0247 | 56 | 332 | C3H Transcription Factor Family | AT2G41980 | 76.978 | 8.14e-163 | 455 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju08g0247 | 08 | 1770728 | 1773675 | Alju08g0247 | 08 | 1770728 | 1773675 | ECH |