Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0243 ATGGGGAAGAAAGGAGGCGGATGGTTCTCGTCAGTGAAGAAAGTTTTCAGATCGTCTTCTAATAAGGACTCGTCGGCACCGGCCAGGAAGAACGATAATGAAAGGAGACAGCCTGAAGTGGCAGAGGTCGTGTCTTTTGAGCATTTTCCTCCGGAGAGTTCACATGATGACGTCACCAATGAGAACAGTATAGCATCCACGCCCGTGACCGAAGATAGAAATCATGCTATCGCGGTGGCAGCGGCCACAGCAGCCGCTGCAGAAGCTGCAGTTGCGGCGGCACAAGCAGCAGCCAGAGTTGTTCGACTGGCAGGTTATGGACGCCACACTAAGGAAGAAAGAGCAGCAACTCTCATCCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACTGCGTGCGTTGAAGGGATTGGTGAGGCTGCAAGCACTTGTGAGGGGCCATAATGTACGGAAGCAGGCACAAATGACAATGCGATGTATGCAAGCATTGGTTCGAGTACAGGCAAGAGTAAGAGCTCGCAGATTCCAGTTGACCCAAGAGCAACTTCACAAGACAGAGGAGGAGTACGGGGAGAGGGAATTTGAGGAACAAGTAGTGCCAAAGCCTATGAGCCCTATGAAAAGGACTGATCTGAGCAGGTGGGACAATGGGCGTCACAGCAGCCAGAAAATCCAGGAAAATGATGCCAGAAAACAGAGGGAGAGAGCTCTTGCTTACGCTCTCAACTGTCAGCAGCAACAGCACTCGGACTCCAATGACGATGATATTGGAGCCATCAAGTACCACGACGAGCGTGAAAAGACGCCGTGGGGTTGGAACTGGCTGGACCGTTGGATGTCATCACAACCGTACAATGTAAGGAGCGTGGGGCCGCGTGAGACCTCTTACATGACCCTTGCAACCACAACCACCACCACCGCCGCCGACGACGACATGTCTGAAAAGACGGTAGAGATGGACATGGTGGCACCTTTAGGCTCAAGCAGCGTCAGCGCTATGGGGCTAATGAACCAGGAGTTTCTTGATTCAAGCCCCAGGTCCAACAGAAAACACCATCGGCAATTCAGTTTCAATGCGCCTAGCTACATGTCTCCCACTCAGTCAGCGAAAGCCAAGGTAAGAGGTGAAATGCCGATAAAGCCACGTGGCTCACCTGGGCCCCAGTGGAACTCGTCCACAAAGAAAGGGCCGGGTATCAGGTCCGTTTGTGATTCTTCAAGCTCCGGAGCAGGAGCGTCCAGTTACAAGTTTCCGAGGAGCCCAAGCCCAAAAATGAATGGGAGCCGCCAGCAGTCTAGGCGGATCGCAGGTAGCAGCCCAGATTATTCTGGGTTCGAGGATTGGGCACTTCCCCTCGGAGGCCATGGTTGGGCATGA 1380 0.5319 MGKKGGGWFSSVKKVFRSSSNKDSSAPARKNDNERRQPEVAEVVSFEHFPPESSHDDVTNENSIASTPVTEDRNHAIAVAAATAAAAEAAVAAAQAAARVVRLAGYGRHTKEERAATLIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRFQLTQEQLHKTEEEYGEREFEEQVVPKPMSPMKRTDLSRWDNGRHSSQKIQENDARKQRERALAYALNCQQQQHSDSNDDDIGAIKYHDEREKTPWGWNWLDRWMSSQPYNVRSVGPRETSYMTLATTTTTTAADDDMSEKTVEMDMVAPLGSSSVSAMGLMNQEFLDSSPRSNRKHHRQFSFNAPSYMSPTQSAKAKVRGEMPIKPRGSPGPQWNSSTKKGPGIRSVCDSSSSGAGASSYKFPRSPSPKMNGSRQQSRRIAGSSPDYSGFEDWALPLGGHGWA 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0243 459 MobiDBLite consensus disorder prediction 27 42 - -
Alju08g0243 459 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Alju08g0243 459 MobiDBLite consensus disorder prediction 355 369 - -
Alju08g0243 459 MobiDBLite consensus disorder prediction 189 232 - -
Alju08g0243 459 MobiDBLite consensus disorder prediction 212 232 - -
Alju08g0243 459 SMART iq_5 111 133 IPR000048 GO:0005515
Alju08g0243 459 SMART iq_5 134 155 IPR000048 GO:0005515
Alju08g0243 459 MobiDBLite consensus disorder prediction 343 459 - -
Alju08g0243 459 PANTHER IQ-DOMAIN 5-RELATED 1 406 - -
Alju08g0243 459 Pfam IQ calmodulin-binding motif 139 154 IPR000048 GO:0005515
Alju08g0243 459 Pfam IQ calmodulin-binding motif 113 133 IPR000048 GO:0005515
Alju08g0243 459 MobiDBLite consensus disorder prediction 16 62 - -
Alju08g0243 459 Gene3D - 109 163 - -
Alju08g0243 459 MobiDBLite consensus disorder prediction 386 439 - -
Alju08g0243 459 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0243 Alju-ChrAlju08 1745535 1747922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0243 1 425 IQD Protein Family AT3G49260 49.227 1.83e-98 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0243 08 1745535 1747922 Alju08g0243 08 1745535 1747922 ECH