Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0231 ATGGCACTGTCAAGCCCGCACATCCAAAGATTACTCGTAACCAAACTCCATGGCCGTTCCACCTCCAACAATGGCATCCGCAGAAACACCTTCGCCAATACTTGCAGACGCCGCTGCTGCTCCGCCATAGCCATCGATACTCCGTCGTCTTTGTCTGACGTGGCAGGCATCCGATGGGGATCCATTGCTTTGCAGGGTCTTCGCGAAGAAATGGAAGATGGCATTATTGTTCGTCCTGATGGCCTCCATGTCTTCTCTTTCGCAGCTGTGTTTGATGGCCATGGAGGATTCTCTTCCGTCGAGTTCCTCAGGGATGAACTGTACAAGGACTGTCTTGCAGCTTTACAAGGTGGGTTATTATTTGATAGAAAAGATTTCCAAGCCATTAATGCAGCATTACAGGAGGCATTTGTTAATGCCGACAAAAGTTTGTTAAAACGGCTTGAAATGAATGGAGATGAAGATGAATCTGGCGCTACAGCAACTGCAATATTCGTCGGAGATGATATGCTTCTCATTTCACATCTAGGTGACTCATCTGTGGTTCTAAGCAGGTCTGGTAGAGCAGAAGGGTTGACTAATCCCCACCGACCCTATGGGAACAGTAAAGCCAGTCTTCAAGAAATTAAAAGAATAAGAGAAGCAGGTGGATGGATTGTCAATGGTAGAATTTGTGGAGACATTGCCGTATCTCGTGCATTTGGGGATATAAGATTCAAAACAAAGAAGAATGAAATGCTGAGAAAAGGGGTTGAGGAAGGAAGGTGGTCTGAAAAATTTGCTTCTCGTGTACAGCTCAACAGAGACTTGGTCATTGCATGCCCTGATATTTATCAAGTACAACTTGGCTCGGATGCGGAGTTTATAGTATTGGCATCTGATGGTTTATGGGACTACATGAGCAGCTCAGAAGCAGTTTCTTTTGTGAGGAATCAACTTCGAGAGCATGGTAATATTCAGCTAGCTTGTGAAGCTCTTGCACAAGCAGCTCTGGATCGACGCACACAGGATAACATTAGCATCATAATTGCTGATTTAGGGCGGACAGACTGGCAGAACTTGCCACTTCAGCGGCAAAACGTTGTTTATGAGGTGGTCCAAGCTTTAGCCACCGTTGGGATAGTGTCACTTGGAATTTGGTTTTCATCCCAGGTCTTATGA 1161 0.4565 MALSSPHIQRLLVTKLHGRSTSNNGIRRNTFANTCRRRCCSAIAIDTPSSLSDVAGIRWGSIALQGLREEMEDGIIVRPDGLHVFSFAAVFDGHGGFSSVEFLRDELYKDCLAALQGGLLFDRKDFQAINAALQEAFVNADKSLLKRLEMNGDEDESGATATAIFVGDDMLLISHLGDSSVVLSRSGRAEGLTNPHRPYGNSKASLQEIKRIREAGGWIVNGRICGDIAVSRAFGDIRFKTKKNEMLRKGVEEGRWSEKFASRVQLNRDLVIACPDIYQVQLGSDAEFIVLASDGLWDYMSSSEAVSFVRNQLREHGNIQLACEALAQAALDRRTQDNISIIIADLGRTDWQNLPLQRQNVVYEVVQALATVGIVSLGIWFSSQVL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0231 386 SMART PP2C_4 48 344 IPR001932 -
Alju08g0231 386 CDD PP2Cc 57 346 IPR001932 -
Alju08g0231 386 FunFam Protein phosphatase 2C 57 57 353 - -
Alju08g0231 386 PANTHER PROTEIN PHOSPHATASE 2C 52 344 IPR015655 GO:0004722|GO:0006470
Alju08g0231 386 ProSiteProfiles PPM-type phosphatase domain profile. 58 346 IPR001932 -
Alju08g0231 386 Pfam Protein phosphatase 2C 60 339 IPR001932 -
Alju08g0231 386 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Alju08g0231 386 Gene3D - 57 352 IPR036457 -
Alju08g0231 386 SUPERFAMILY PP2C-like 53 347 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0231 Alju-ChrAlju08 1690439 1693599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0231 1 323 PP2C-type Phosphatase Gene Family AT4G27800 60.923 1.01e-142 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g0231 08 1690439 1693599 Alju08g0231 08 1690439 1693599 ECH