Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0203 ATGGGTCATTGTTGCAGCAAAAACCTTTCTGCCGTTGACAATGAAACCTCCAACACAGACTCTCACCACAAACCTCCTCATTCCGCTGCATCGCCCCACTCTTCTGTCCATTCGGTCTCCAGAGCCACCGATGCTACCCCTGCCCGCCAGAGTTATGCCAATTCCTACTCCACCAGTCCCTTTAACAGCCCCCTCCCGCCGTCTCCGGGGGGGACTCCCGGCAGGAAATTTCGATGGCCTCTGCCGCCGCCGTCGCCCGTGAAGCCGATCATGGCGGCAATACTGAAGCGGCAGGGGAAAGCTCAGCCTAAGGAGGGGTCCATACCGGAGGAGCAAGGAGAAAGCACACCTGGCGAGAGGCCGTTGGATAAGAGCTTTGGGTTTGCCAAGAATATTGGCTCCAAATATGAGCTGGGGAAACAAGTAGGACGAGGACACTTTGGTCATACTCACTTGGCCAAGGCAAAAAAGGGAGTGCTTAAGGGGCAGTCTGCAGCTGTGAAAATAATTTCCAAAGCAAAGATGACAACGGCCATAGCAATTGAAGATGTAAGGAGGGAGGTGAAAATGTTGAAAGCTTTATCTAGTCATAAAAATATAGTCAAGTTTCACGACGCATTTGAGGATGCCAACAACGTCTACATAGTGATGGAGTATGTGCAAATACAAAATCTCTGGAAAGTTGCTTTTAATGCTGATAAGATTTTAGTCACATATTTATTTTCTTGCCGGTTTAACGTATCCTTGTTCTCACCAGACTGTGTGATGGAGGAGAACTACTTGATAGAATTCTCTCGAGGGGGAAGATACACAGAAGAAGATGCAAAAGTTATTATTGTACAAGCTCTAAACGTAATGGCCTATTGTCATCTTCAAGGAGTTGTTCATCGTGATCTAAAACCAGAGAATTTTCTCTTTGTCTCAAAAGATGATGATGCTCTGATGAAGGTTATTGACTTTGGTCTATCTGATTTCGTGAGACCAGATCAACGGCTGAGTGATGTTGTTGGGAGTGCCTACTATGTTGCACCTGAGGTGCTCCATAGATCTTACAGTGTGGAGGCAGATTTATGGAGCATTGGGGTTATAACATACATATTATTATGTGGAAGCAGACCATTCTGGTCACGCTCTGAATCAGGAATCTTTCGATCTGTGCTAAAAGCTACTCCTAACTTCAATGATTCGCCTTGGCCGTCTGTATCACCAGAGGCTAAAGACTTTGTGAAGAGACTTTTGAACAAGGATCTCAGGAAAAGGATGACTGCTGCCCAAGCATTGACTCACTCGTGGTTGAGAAATGAAAACCAAGCCATTCCATTAGACATTTTAATCTACAAGCAAGTCAAGTCATATTTGCATGCCACGCCTTTGAGACGTGCAGCACTCAAGGCCCTCTCTAAGGCATTGACAGAAGATGAGCTTATCTACCTTAGAGCACAGTTTAGCCTCTTGGAACCAAAAAATGGCTGCATTTCCCTTGACAATTTTAGAGCGGCTCTAATGAAAAATGCAACTGATATTATGAAGGAAGCCAAGGTCCCCGACATTTTAAACTTGGTGCGACATCTTTGCTCTATGGATTCACTTGCCTCCATAAAAATGGACTTCGAAGAGTTTTGTGCTGCTGCAATCAGTGTGTACCAGCTTGAGGTTCATGAAGAGTGGGACAAAATCTCAAAAACAGCATTTGAGTGTTTCGAACAAGCAGGAAACATAGTCATTTCAGCTGAGGAGTTGAAAAAGGAGATGAATCTGGGTGCTTCATCTTACTCTTTACCGGCCAATTGGATCCGAGAATCCGATGGGAAACTCAGCTTTGTTGGATATACAAAGTTTTTGCACGGCATCACTATTCGCAGTTCAAACACAAGACAAGGACAGAATGGTTCGTGA 1896 0.4504 MGHCCSKNLSAVDNETSNTDSHHKPPHSAASPHSSVHSVSRATDATPARQSYANSYSTSPFNSPLPPSPGGTPGRKFRWPLPPPSPVKPIMAAILKRQGKAQPKEGSIPEEQGESTPGERPLDKSFGFAKNIGSKYELGKQVGRGHFGHTHLAKAKKGVLKGQSAAVKIISKAKMTTAIAIEDVRREVKMLKALSSHKNIVKFHDAFEDANNVYIVMEYVQIQNLWKVAFNADKILVTYLFSCRFNVSLFSPDCVMEENYLIEFSRGGRYTEEDAKVIIVQALNVMAYCHLQGVVHRDLKPENFLFVSKDDDALMKVIDFGLSDFVRPDQRLSDVVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWSRSESGIFRSVLKATPNFNDSPWPSVSPEAKDFVKRLLNKDLRKRMTAAQALTHSWLRNENQAIPLDILIYKQVKSYLHATPLRRAALKALSKALTEDELIYLRAQFSLLEPKNGCISLDNFRAALMKNATDIMKEAKVPDILNLVRHLCSMDSLASIKMDFEEFCAAAISVYQLEVHEEWDKISKTAFECFEQAGNIVISAEELKKEMNLGASSYSLPANWIRESDGKLSFVGYTKFLHGITIRSSNTRQGQNGS 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0203 631 FunFam CDPK-related kinase 1 261 446 - -
Alju08g0203 631 FunFam CDPK-related kinase 1 129 223 - -
Alju08g0203 631 Gene3D - 471 545 - -
Alju08g0203 631 MobiDBLite consensus disorder prediction 62 89 - -
Alju08g0203 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Alju08g0203 631 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Alju08g0203 631 Gene3D Transferase(Phosphotransferase) domain 1 259 451 - -
Alju08g0203 631 Gene3D Phosphorylase Kinase; domain 1 119 221 - -
Alju08g0203 631 CDD STKc_CAMK 135 431 - -
Alju08g0203 631 Pfam Protein kinase domain 262 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0203 631 Pfam Protein kinase domain 136 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0203 631 MobiDBLite consensus disorder prediction 1 124 - -
Alju08g0203 631 Gene3D - 452 590 - -
Alju08g0203 631 PANTHER SERINE/THREONINE-PROTEIN KINASE 120 598 - -
Alju08g0203 631 SUPERFAMILY Protein kinase-like (PK-like) 133 455 IPR011009 -
Alju08g0203 631 SUPERFAMILY EF-hand 465 615 IPR011992 -
Alju08g0203 631 SMART serkin_6 136 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0203 631 ProSiteProfiles Protein kinase domain profile. 136 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0203 631 FunFam CDPK-related kinase 1 468 545 - -
Alju08g0203 631 MobiDBLite consensus disorder prediction 31 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0203 Alju-ChrAlju08 1508886 1512602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0203 59 621 EF-hand Containing Proteins AT3G50530 53.846 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju08g0203 Pkinase 4.3e-46 CL0016