Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0196 ATGAAAGCAGTCCCCACCAAAGAGGACGATACTTCACAGGAACAATTGGAGGGTGGAGACTCATATCGCTTTCGGCAGCATCGAGGGTTCATGGGGAAGGCTGGAGGAAGCTCTTGGTTGGCAACTGTGAGAAGGGCTTTCAGGTCTCCCACCAAAGAAAAGGGCAAGAAAAGCATCAGGACTAGAGAAGAGCACGAACAAGAGGAGGAGGAAAAGAAGAGGGGAAAACGAAGATGGATCTTCAGAAGCCCCTTTGGCCAAGAGACAACAAGCCTGCATTGCGAAGAAAGAACCATAACAAGTGTAGCTGATGAAACGACAACGCGTTATGATGCAGAGCAACAAAGGCGTGCAATTGCAGTAGCCATGGCAACCACAGCGGCTGCTGAGGCGGCGTTAGCCACCGCTCAAGCAGCTGTGGAGGTTGTTCGCCTTTCTAAGCCTCCCTTCTTTGTCAGAGAACATAACGCTGCCATTGTAATCCAAACAGCTTTCAGAGGCCATCTGGCGAGGAGAGCTCTTGGGGCGCTTAAAGGATTAGTGAGGCTGCAAGCATTAGTGAGAGGTCATAATGTACGAAAACGAGCTAAACTAACACTGGAGTGCATACAAGCTGTCATTCGAGTTCAAACTCGAGTGTGCCAACAGCGAGCCAAGAGGCTCTCACAACATGAAAGAGCCACAGATTCCACAGACGAGCGAGGGACAGATCAGCAAATGTGGATGCGCTGGGATGACCCCCCACGAACGGTTGATAACATTCGAGCTCTTCTACAGAGAACAGAGGAAGTTTCCTTGAGAAGTGAAATGTCCCTGGCTGATGCCTTCTCTCATCAGATATGGACAACTGGTAGAGAAGCATGCACCGGCCATGAAGAGGTAGAAGACAGAGACGTTTCCACGTGGAGGAGAAGATGCAGAGAGAAAAGAGTCAGAGCTTCGTGTGGTCCAAGAGACGCCATCAAAATAGTTGAAATCGATACATACAGTCCTTACTCTAACCATGTTTTCGCTGATAAGAAGAGATCATATGGTGGGTATAAACCTGAGTTCATTAAACCACCGAGACTTTCATTTTCTTCGCCTAATAAAGCCCACTACGAGATATCAATGGCAACGACACCACCACCAATGAGGATGAAGCATGTTGAGATGGATTCAGCTGTAAAGTCCAATACTTTGATGCCTAACTATATGGCAGCCACTGCATCTGCGAAGGCTCGGTCTCGCCCACAAAGCACCCTCAGACACAGGATTTCAACCACCGAGAAGGATAGAACGGGATCCATTAAGAAACGCCTTTCATTCCCAGCTCCTAATTCTTGCGATGGCGTCGACACTTGA 1344 0.4866 MKAVPTKEDDTSQEQLEGGDSYRFRQHRGFMGKAGGSSWLATVRRAFRSPTKEKGKKSIRTREEHEQEEEEKKRGKRRWIFRSPFGQETTSLHCEERTITSVADETTTRYDAEQQRRAIAVAMATTAAAEAALATAQAAVEVVRLSKPPFFVREHNAAIVIQTAFRGHLARRALGALKGLVRLQALVRGHNVRKRAKLTLECIQAVIRVQTRVCQQRAKRLSQHERATDSTDERGTDQQMWMRWDDPPRTVDNIRALLQRTEEVSLRSEMSLADAFSHQIWTTGREACTGHEEVEDRDVSTWRRRCREKRVRASCGPRDAIKIVEIDTYSPYSNHVFADKKRSYGGYKPEFIKPPRLSFSSPNKAHYEISMATTPPPMRMKHVEMDSAVKSNTLMPNYMAATASAKARSRPQSTLRHRISTTEKDRTGSIKKRLSFPAPNSCDGVDT 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0196 447 Gene3D - 152 201 - -
Alju08g0196 447 ProSiteProfiles IQ motif profile. 178 205 IPR000048 GO:0005515
Alju08g0196 447 SMART iq_5 153 175 IPR000048 GO:0005515
Alju08g0196 447 SMART iq_5 176 197 IPR000048 GO:0005515
Alju08g0196 447 MobiDBLite consensus disorder prediction 417 431 - -
Alju08g0196 447 Pfam Protein of unknown function (DUF4005) 371 443 IPR025064 -
Alju08g0196 447 Pfam IQ calmodulin-binding motif 155 173 IPR000048 GO:0005515
Alju08g0196 447 Pfam IQ calmodulin-binding motif 181 197 IPR000048 GO:0005515
Alju08g0196 447 MobiDBLite consensus disorder prediction 1 27 - -
Alju08g0196 447 MobiDBLite consensus disorder prediction 1 75 - -
Alju08g0196 447 ProSiteProfiles IQ motif profile. 154 182 IPR000048 GO:0005515
Alju08g0196 447 PANTHER IQ-DOMAIN 5-RELATED 31 438 - -
Alju08g0196 447 MobiDBLite consensus disorder prediction 47 75 - -
Alju08g0196 447 MobiDBLite consensus disorder prediction 403 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0196 Alju-ChrAlju08 1483822 1486563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0196 31 439 IQD Protein Family AT1G01110 35.876 2.47e-65 217