Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0174 ATGGGTGCGGCCGTCGAGTGTTGTCCGCCGCGCGCTGATGAGGTGGCGGTGTTACCGCTGAATTCGCTCCCTCTAGGCTTTAGGTTTCGTCCTACGGATGAGGAGCTGATCGATTACTATTTGCGACAGAAGATCAACGGAAATGGGGCTGACGTATGGGTTATTCGAGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCCCATTTATCGGTTATACGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCGCAGGATCGTAAATATCCGAATGGGCATCGATTGAACCGAGCGACGACTCATGGGTACTGGAAGGCAACGGGCAAAGATCGCAAAATTAAGTCTGGTTCGATCGTGATTGGAATGAAGAAGACTTTAGTGTTCTATACTGGTCGTGCACCCAGAGGGAAGAGGACCAATTGGGTTATGCATGAGTACCGTCCTACCCTAAAGGAGCTCGATGGTACCAACCCTGGACAGAGTGCATATGTCCTTTGTCGTTTGTTTAAGAAGCAAGATGAGACTCTTGAAGGTTCAAACTGTGAGGGAAATGACCGGACTGTGTCAACTCCAACTACTGCTAATTACTCCCCGGAAGAAATACAATCTGAAGTGTTTCCAATGGTAGCTTCTCCGTCCCTAGCTACTGAAGATGTTAAGAACATAACAGTTCCATTCTCTACCCCTGAGAATTCTGAGGAAGCCACATCCAACATTATAACACCTGTTGATGGCAACAGCGAAGAATGTGATACTTGTGATGTACAAAATAAGATTGTTATTCCAACAACTGCAGAGGAAGATCAGCTTCTGAACTTTGACATGTTTTATGATCCAACAACTGAACCGTTGGATGACAAACTATTCTCCCCTGTACATCAGCATATCCCACCCGAATTTTGTTATCCTTCAAGCAATGAAGTGGATAATTGTGGGTTGCAACTTCAGTACGGTACAAATGAGATTAATATCACCGAGTTTATAAACTCAGTTGTCAACTGGGATGAGTTATCCTATGATTCCAGCAGTCAAAAGCCCACTTCCACCTTGGTTGATGCCAAGGATAATGGATCGGCCAGTGATTCAGATGTGGAAATGCCAAATATACTGAGACTGCAAGCATTACGTGCCGAGAATGCTGGTGAGGCAATTGACACAAAGCCTTCTTCAAATTTGGAGAAAACTTTGGGCTTCCACGACACCTTCAACTCTGAACTTAGTGGTGATGGGAAGAGCCATATGGGATTATTACAAAACAATCTTCTAATGGCCTCACCTGATGCTGGCATGGGCCAAGTGTACAACATGGACAATGGATCCAAAAATTATGATTCAGTTGTTAATGGTAGTATTGGTACTGGAATCAGGATAAGGTCTCGCCAAGTACGGAATGACATGCCAAACACAAACCCCGATAGCCAAGGTACTGCACCCAGGAGAATCCGTCTGCAACGTAAACTTCAAGTGCACCCTCTTGGCTGCAATGAGGTGGGCGAAGGTGGGAGTTGCATAACAGAGGATCATGATTCAAAGCCTATCATTCCGGGGGAGACAAAAGCTTCAGAAAATAACGCTGATGATGTGGATGCTGTGGATTCCAAAGTTGTAGATGAACCCCAGAAGACTTCTCCTGAGTCAACTGACATCACAAAGGTTCCCGAGGAACATACTGCAACTGCGGGGTCCTTCTTGAAGTTGAAAGGCATCAAAAGCTTGTGCACAAGGACCCGTTACACATCAAAAGCGTCCATCAAACTCACAGTTTGGTCATCTGTTGTACTTTTTGTCATTGTACTGGTCCTAGTAGTAGTATTAGCTCACGTATGGGGGCATTCTAGAAGTTGA 1851 0.4527 MGAAVECCPPRADEVAVLPLNSLPLGFRFRPTDEELIDYYLRQKINGNGADVWVIREIDVCKWEPWDLPHLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSIVIGMKKTLVFYTGRAPRGKRTNWVMHEYRPTLKELDGTNPGQSAYVLCRLFKKQDETLEGSNCEGNDRTVSTPTTANYSPEEIQSEVFPMVASPSLATEDVKNITVPFSTPENSEEATSNIITPVDGNSEECDTCDVQNKIVIPTTAEEDQLLNFDMFYDPTTEPLDDKLFSPVHQHIPPEFCYPSSNEVDNCGLQLQYGTNEINITEFINSVVNWDELSYDSSSQKPTSTLVDAKDNGSASDSDVEMPNILRLQALRAENAGEAIDTKPSSNLEKTLGFHDTFNSELSGDGKSHMGLLQNNLLMASPDAGMGQVYNMDNGSKNYDSVVNGSIGTGIRIRSRQVRNDMPNTNPDSQGTAPRRIRLQRKLQVHPLGCNEVGEGGSCITEDHDSKPIIPGETKASENNADDVDAVDSKVVDEPQKTSPESTDITKVPEEHTATAGSFLKLKGIKSLCTRTRYTSKASIKLTVWSSVVLFVIVLVLVVVLAHVWGHSRS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0174 616 MobiDBLite consensus disorder prediction 507 529 - -
Alju08g0174 616 Gene3D NAC domain 32 178 IPR036093 GO:0003677|GO:0006355
Alju08g0174 616 Pfam No apical meristem (NAM) protein 24 149 IPR003441 GO:0003677|GO:0006355
Alju08g0174 616 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 22 239 - -
Alju08g0174 616 FunFam Nac domain-containing protein 86 32 176 - -
Alju08g0174 616 ProSiteProfiles NAC domain profile. 23 173 IPR003441 GO:0003677|GO:0006355
Alju08g0174 616 MobiDBLite consensus disorder prediction 344 358 - -
Alju08g0174 616 SUPERFAMILY NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Alju08g0174 616 MobiDBLite consensus disorder prediction 344 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0174 Alju-ChrAlju08 1333204 1336569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0174 15 508 NAC Transcription Factor Family AT4G35580 38.966 7.82e-98 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju08g0174 NAM 3.5e-36 No_clan