Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0171 ATGCCCATTCTAACATTTTGTCATTCGAAGTTGAGTCCTTCGTTAACTCTACAGCTACCTTCTAACTGCATGAGAAGAATGGGTTTGATTACGCAATTTAAGTGTTCTGTAGTTAACAGAACATTGACTTCTAGCTCTGTGGCTCCACCCACATCCAAACCAGACTCCCCCCGCTTGAACCGGAAACAAGGGCGTTCATCTTCATTATATAGTCGTCCCAGTTTATCAGAAATGAACAAAGAGAGGATGGCAAACCGTGAGAAAGTTTATGCATTCTTGCGGGGGATTGGTATTGTTCCCGATGAGCTTGATGGCCTGGAACTTCCTGTGACAGTGGAAGTTATGAGGGAACGAGTAGATTTTCTTCACAATTTAGGTCTTACAGTTGAAGACATCAACAATTATCCATTAGTTCTTGGCTGCAGCGTCAAAAAGAATATGATCCCTGTACTTGATTACCTTGGTAAATTGGGAGTCCGGAAATCTACATTCACTCAATTCTTGCAGAGATATCCACAAGTTCTTCATGCTAGTGTTATCATTGACCTTGAGCCTGTGGTCAAGTATCTTCAAGGGATGGATATCAAGCCCAGTGATATTCCTCGGGTTCTGGAGACATATCCAGAAGTGCTAGGATTCAAGCTTGAGGGAACCATGAGCACTTCAGTTGCTTATTTGGTTGGCATTGGTGTTGGAAGAAGAGAAATTGGAAGGGTTCTAACAAGATACCCTGAGATTTTGGGAATGAGAGTTGGTAGAGTAATCAAGCCTTTTGTGGAGTATCTGGAAACCTTGGGAATTCCAAGATTAGCTGTTGCAAGAATAATAGAGAAACGACCTTATATTCTTGGCTTTGGATTGGACGAGAAGGTGAAGCCGAATACTGAAGCTCTTGAAGAGTTCAATATTAGAAGAGCATATCTGCCCTCTGTAATTGCGCAGTATCCTGATGTCATGGGAATGGACTTGAAGCCAAGGCTTGAGAATCAGAGCAATTTACTTAAATCCTTACTTGATTTGGATTCTGAAGATTTTGGTAGAGTTGTTGAGAAGATGCCACAGGTAATTAGCCTCAGTAGTGCGCCTATGTTAAAGCATGCTAATTTCCTCAAGGATTGTGGGTTTTCCTTGCAACAAATGAAGAAAATGACTGTTGGATGCCCTCAACTTCTCGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTTCAAAAGGAGATGGGGAGGCCTTTAGAAGACTTGGTTGCTTTCCCAGCCTTCTTTACATACGGTCTGGAGTCAACTGTAAAACCCAGGCATAAGATGGTTGCCAAGAAGGGAGTGAATTGTTCCCTTGCATGGATGCTTAATTGCTCAGATGACAAGTTTGAGCAACGAATGGATTATGACACTATTGACATAGAGGAAATGGAAATGGGATCATCGTTTGACATGAATTCACTGATGGAACCAAGGAGTGACGAGTCAGCTTCTGATTATGATGACAGTGATGATGACGATGATGATGAATAG 1518 0.417 MPILTFCHSKLSPSLTLQLPSNCMRRMGLITQFKCSVVNRTLTSSSVAPPTSKPDSPRLNRKQGRSSSLYSRPSLSEMNKERMANREKVYAFLRGIGIVPDELDGLELPVTVEVMRERVDFLHNLGLTVEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLQRYPQVLHASVIIDLEPVVKYLQGMDIKPSDIPRVLETYPEVLGFKLEGTMSTSVAYLVGIGVGRREIGRVLTRYPEILGMRVGRVIKPFVEYLETLGIPRLAVARIIEKRPYILGFGLDEKVKPNTEALEEFNIRRAYLPSVIAQYPDVMGMDLKPRLENQSNLLKSLLDLDSEDFGRVVEKMPQVISLSSAPMLKHANFLKDCGFSLQQMKKMTVGCPQLLALNIDIMKLSFDYFQKEMGRPLEDLVAFPAFFTYGLESTVKPRHKMVAKKGVNCSLAWMLNCSDDKFEQRMDYDTIDIEEMEMGSSFDMNSLMEPRSDESASDYDDSDDDDDDE 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0171 505 FunFam Transcription termination factor MTERF4, chloroplastic 253 467 - -
Alju08g0171 505 MobiDBLite consensus disorder prediction 475 505 - -
Alju08g0171 505 FunFam Transcription termination factor mterf4, chloroplastic 115 252 - -
Alju08g0171 505 Pfam mTERF 151 459 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 MobiDBLite consensus disorder prediction 44 75 - -
Alju08g0171 505 PANTHER CGI-12 PROTEIN-RELATED 150 461 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 MobiDBLite consensus disorder prediction 44 81 - -
Alju08g0171 505 Gene3D Transcription termination factor 3, mitochondrial 256 467 IPR038538 -
Alju08g0171 505 Gene3D Transcription termination factor 3, mitochondrial 130 255 IPR038538 -
Alju08g0171 505 SMART mt_12 309 341 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 381 412 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 346 376 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 201 232 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 66 99 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 413 444 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Alju08g0171 505 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0171 Alju-ChrAlju08 1322480 1323997 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju08g0171 mTERF 4.9e-105 No_clan