Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0154 ATGTGGATGTTCAGAAGGAGACTTGAGAGACCGGGAATTTGGATAACCTTTTCATTCATTCCTTCTAAAACAAATAAAATTTCTTACTTTTTTTCAATTAGAAATCCCGAAATGTCTTTACTTTTTTTCCCCCTGAAAATGTCTTTTACTCTATCCATGGTCGGTGTCACTTCTAAGTACACAGCCAGTCTAGTTGTAGCCTTGGAGGAGATGGAGACTCTGAAAGCTGCAATCCCGGAGAGCCTGAAGCGAATGATTGGAGAGAGCACTACAGATGATCTTCCGACCACATGTTCTTCTCTTCACCATTTCTTTCTTCATTTTGAGCCTTTTCACCAAATGGTGAGTGACTTAGCAGACCCAAAAAATGCTATATGCGGTAAGAGTGAGGCCGCTGCTTCTGAATCCAAGCAGCTTGGCAACCATTACTTCTTGAGACAAGATTATATGAAGGCTTTGAATTGCTATACGAAGGCATTGCGTATGGCTCCTTTGGAGGCTATTGACCCGGAGAAGAATCTGGTTGCAATATTATATATTAATCGAGCTACTGTATTGCATAAATTGAATCTTTTAATTGAGTGTTTGCGAGACTGCAATCGAGCTCTTCAGATATGTCCAAGCTATGCAAAGGCGTGGTATAGGAGAGGTAAGGTGAATGTTTCATTGGGAAATCATAAAGATGCAATCTGTGATCTCAATGTGGCAAAGAGCATTGAATCATCATTGAGTGGAAAGAAACAAATAGAAAGTGAACTTAAAAATATATTACACCAATGCGAGGGGACAAGTTCAGTAGTTCAGAATGAGAAGAATGGCTTGGATACAGTAGATGAAATGGCCCAAATAAAGCTACAGTTAGTCACCACGCCTGATAAAGGACGGGGTATGACATCGTCATGTGACATATCACCAGCTTCTTTAGTTCATCGTGAAGAACCTTATGCCATGATAATATTAAAGCAATGCCGAGAAACACATTGCCACTACTGCTTGAATGACCTACCTACTGATGCAGTTCCTTGTAGATCTTGTTCAATACCACTATATTGCTCCCAGCAATGCCAGATACAGGCTGGTGGACCAATGGTCAAGATTAATCCTGAAGACCATGGCTTTCTTTACAGTCTGCCCTGTGATCTTGGGACATATGCTACAGGAATTATATTAGGCAATGATTCTAAACATGAGATTGAGGATATTCCTGAACATAAGCATGAGTGCCAAGGTGTACATTGGTCTACAGTATTACCATCTGAGATTGTTTTGGCAGGCCGAGTACTAGCAAAGTTTTTCCACAAAAGTGCATATGAAAATATTACATACTTTGTGAAAAGCCTGGAGCTTTTTCATTGTTATGCGCAACTGCCGTCTGAAAGCAAATTGGATTTACATATATATGCCATTGTATTGCTGTACTGTCTGCTATACTCTTGTGGTGCTAGGTTTTCCATGGATGGGATCACCATGTCACAGGTGGTCATAATTTTTTCCCAAATCAAAGTGAATTGCATGACTGTTGTTCGTATAAGATCTATAGATGCTCGTGGACTACAAGATCAGTTTGGAGAATCTCTAGCCAGTGGATATTTGACTAGTAATGTCGAACAGGTCAGAGTGGGTAAAGCTATTTACAGAGATGGCAGCTTGTTCAACCATTCTTGCCAACCAAATGTTCATGCTTATTTTCTTTCACGTACTTTGTGTATACGGACAACAGAAGTTGTAGCAGCTGGGTCTCAGCTGGAATTATCCTATGGTCCGCAGGTTGGGTTGTGGGATACTAAAGATCGCCAAGCCTTTCTGAAAGACGAGTACTCGTTTCAATGTCACTGTGGTGCTTGTTCAGAATTCAATCTATCTGACATTGCCCTTGATGCTTTTCACTGTGTCAGTCCAGATTGTACTGGTGCTGTCTTGGATGGCAGAGTAGTTAACTGGGAAAGGCAGAAAATTAAGCACTTCCCTGGTGCTGACAAAGTTGACAAGAATGATGACATTTATAAAATCTGTCTTCGTTTATTCAACCAAAATGATGGCTACGCTCATATTCAGCCAGGGTACTGTTTGAGATGTGGTTCTTACCGTGATTTAGAGACTTCATGCACTGCAGCTGATAAAGCTTGGATATGCATCAAAAGATTGCAGGATGCAGTAATATCAAAAGAAATTTTGAATACTACTATTTCAAATGCATTAAAATCCCTTCGTACGCTGAGGTCATATTTGCATTCCTACAACAAGCATATTGCAGAGGCAGAGGACAGCCTTGCTCAGGCCTTTTGTACGGTGGGAGAATTACAATTAGCAATGGACCATTGTAAAGCGTCTTTGCTGATTCTGGAAAAGCTATATAATCCGGATGATATTGTCATTGGCTTTGAGCTAGTGAAGCTTTGTTCCATTCAAATTTCCATGGTTGATAAAACTGCGCCGGAAAGCATAAATCGAATATGGCCTGAAGGGACTCAAGGAAAGCTTTTCCGGCAAAAGGAGCACGAAGAATTGAGATTTTATGCAGTGACTTCTTCGGTGAAAGAATTCAACAGTGAAAACTTCAGTAACCCGTTCGTGCAAGTTATTAATCTGAAAGAATAA 2598 0.4045 MWMFRRRLERPGIWITFSFIPSKTNKISYFFSIRNPEMSLLFFPLKMSFTLSMVGVTSKYTASLVVALEEMETLKAAIPESLKRMIGESTTDDLPTTCSSLHHFFLHFEPFHQMVSDLADPKNAICGKSEAAASESKQLGNHYFLRQDYMKALNCYTKALRMAPLEAIDPEKNLVAILYINRATVLHKLNLLIECLRDCNRALQICPSYAKAWYRRGKVNVSLGNHKDAICDLNVAKSIESSLSGKKQIESELKNILHQCEGTSSVVQNEKNGLDTVDEMAQIKLQLVTTPDKGRGMTSSCDISPASLVHREEPYAMIILKQCRETHCHYCLNDLPTDAVPCRSCSIPLYCSQQCQIQAGGPMVKINPEDHGFLYSLPCDLGTYATGIILGNDSKHEIEDIPEHKHECQGVHWSTVLPSEIVLAGRVLAKFFHKSAYENITYFVKSLELFHCYAQLPSESKLDLHIYAIVLLYCLLYSCGARFSMDGITMSQVVIIFSQIKVNCMTVVRIRSIDARGLQDQFGESLASGYLTSNVEQVRVGKAIYRDGSLFNHSCQPNVHAYFLSRTLCIRTTEVVAAGSQLELSYGPQVGLWDTKDRQAFLKDEYSFQCHCGACSEFNLSDIALDAFHCVSPDCTGAVLDGRVVNWERQKIKHFPGADKVDKNDDIYKICLRLFNQNDGYAHIQPGYCLRCGSYRDLETSCTAADKAWICIKRLQDAVISKEILNTTISNALKSLRTLRSYLHSYNKHIAEAEDSLAQAFCTVGELQLAMDHCKASLLILEKLYNPDDIVIGFELVKLCSIQISMVDKTAPESINRIWPEGTQGKLFRQKEHEELRFYAVTSSVKEFNSENFSNPFVQVINLKE 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0154 865 Gene3D Tetratricopeptide repeat domain 592 816 IPR011990 GO:0005515
Alju08g0154 865 Gene3D SET domain 489 586 IPR046341 -
Alju08g0154 865 Gene3D Tetratricopeptide repeat domain 108 270 IPR011990 GO:0005515
Alju08g0154 865 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 71 817 - -
Alju08g0154 865 SUPERFAMILY TPR-like 134 243 IPR011990 GO:0005515
Alju08g0154 865 Pfam SET domain 498 587 IPR001214 GO:0005515
Alju08g0154 865 SMART tpr_5 176 209 IPR019734 GO:0005515
Alju08g0154 865 SMART tpr_5 210 243 IPR019734 GO:0005515
Alju08g0154 865 SMART tpr_5 751 784 IPR019734 GO:0005515
Alju08g0154 865 SMART tpr_5 133 166 IPR019734 GO:0005515
Alju08g0154 865 SUPERFAMILY SET domain 281 616 IPR046341 -
Alju08g0154 865 ProSiteProfiles SET domain profile. 283 587 IPR001214 GO:0005515
Alju08g0154 865 ProSiteProfiles TPR repeat profile. 133 166 IPR019734 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju08g0154 SET 6.2e-07 No_clan