Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0132 ATGGCTTCTAAGATATCAGGCCCTACTTCTTCTTCTTGTTCGAATCGGATGACGGAAAACGACGACGTTCCTCATGTTTTAGCGGTGGATGACAATCTCATTGATCGCAAACTTGTGGAGAAACTTCTCAGGAACTCTTCTTGCAAAGTGACAACGGCAGAAAATGGGGCGAGGGCATTGGAACTGTTGGGGCTGGCAACTGATGAACACAACAGCGTCAACAAAGGCACTGGATCCAAAGTTAATTTGGTGATCACAGACTATTGTATGCCTGGGATGACGGGCTATGATCTACTCAAGAGGATCAAGGAATCGTCTACCATGAAGGAGGTTCCGGTGGTCATCATGTCATCTGAGAACGTGCCTACTCGTGTTACCAAATGTTTGGAGGAAGGAGCTCAAATGTTCATCCTCAAACCCCTTAAGCAATCTGATGTTAATATACTGACGTGTCAACTGATGAACTGCACAGGCTAA 477 0.457 MASKISGPTSSSCSNRMTENDDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGARALELLGLATDEHNSVNKGTGSKVNLVITDYCMPGMTGYDLLKRIKESSTMKEVPVVIMSSENVPTRVTKCLEEGAQMFILKPLKQSDVNILTCQLMNCTG 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0132 158 SMART REC_2 24 150 IPR001789 GO:0000160
Alju08g0132 158 ProSiteProfiles Response regulatory domain profile. 25 154 IPR001789 GO:0000160
Alju08g0132 158 Pfam Response regulator receiver domain 26 145 IPR001789 GO:0000160
Alju08g0132 158 SUPERFAMILY CheY-like 24 149 IPR011006 -
Alju08g0132 158 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 153 IPR045279 GO:0009736
Alju08g0132 158 CDD REC_typeA_ARR 26 149 - -
Alju08g0132 158 Gene3D - 25 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0132 Alju-ChrAlju08 1039368 1040188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0132 7 156 Response Regulator Gene Family AT3G56380 64.901 7.69e-62 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju08g0132 Response_reg 2.3e-22 CL0304