Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0129 ATGTCTCTTCACAAACTTGCTCGGCGTCTTCTGCTGGACCATGATTCAACCCCAACCCCACCGGAGAGCATATACAGGACGAGGGTGACTTATACAAGTGATGCTAATTTTGACACCAACATGGTGATCATATTAGCAGCCTTGCTCTGTGCACTCATATGTGCTTTGGGTCTGAATTCAATAGTACGATGCGCTCTCAGATGCAGCCGAAGGTTGGCTTTTGAGACGGCGGAGGAGGCGGCTGCACGTTTGGCTGCTAAAGGGCTGAAGAAGAGTGCCTTGCGTCAGATACCTATAGCTGTGTGTGGTTCATCAGGAGCTGAGATTGCAGGTACCGATTGTCCAATTTGCTTAGGGGAGTTCGTGGACGGAGAGAAAGTTAGAGTTCTTCCAAAATGCAACCATGGATTCCATGTAAAGTGCATAGACACGTGGCTGCTCTCTCATTCATCTTGTCCTACTTGCAGGCAGACTCTTCACGAACCCACCATTTCTAAGGCTGTGTCCGATCAGGCTGCTTAA 522 0.4904 MSLHKLARRLLLDHDSTPTPPESIYRTRVTYTSDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETAEEAAARLAAKGLKKSALRQIPIAVCGSSGAEIAGTDCPICLGEFVDGEKVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQTLHEPTISKAVSDQAA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0129 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 164 IPR013083 -
Alju08g0129 173 CDD RING-H2_EL5-like 113 156 - -
Alju08g0129 173 SMART ring_2 114 155 IPR001841 -
Alju08g0129 173 PANTHER RING-H2 FINGER PROTEIN ATL78 7 170 IPR044602 GO:0016567|GO:0016740
Alju08g0129 173 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Alju08g0129 173 SUPERFAMILY RING/U-box 108 162 - -
Alju08g0129 173 Pfam Ring finger domain 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0129 Alju-ChrAlju08 1024532 1025053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0129 9 159 C3H Transcription Factor Family AT3G10910 57.576 1.37e-56 174