Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0100 ATGGGTGTTTATGATCAAGGTTCTAACATCACTTCTTTGCCATTGGATTCTTCTAGGAAGAGGAAAAGTCGTAGTAGGCGGGATGGTTCTAAATCTGTGGCTGAGACTCTGGCAAAGTGGAAAGAATATAATGAACATCCCGAATCTAGCAAAGGTGGTGGGGGCAAACCAACTCGCAGAGCCCCGGCCAAAGGTTCAAAGAAAGGGTGTATGAAGGGTAAAGGAGGGCCTGATAACTCAAGATGTAATTACAGGGGCGTGAGACAAAGAACCTGGGGAAAATGGGTTGCTGAGATTAGGGAACCAAACAGAGGAAGTAGGTTGTGGTTGGGTACATTCGCTACTGCGTATGAAGCTGCTCTTGCTTATGATGAAGCTGCTAGAGCCATGTATGGTGCCTGTGCCCGCCTCAATTTTCCCAACATATCGGATTATACTTCTTGCAAGGAATCCCTCAAGGTCTCTTCACCGGCTACAACTTTTTCAAGTTCTTCAGTGGCAACCCCTGCTGGTTCGGACACAACAAGCATATCAAATCATTCTGAGGTCTGTGCGGCTGAGGATGTTAAGACAAGACATCAACCTACCAAAACTGATGATGTCGATAATATTCATCTTGAAGCTGGTGAAGTTGCCTTAACAAATATGAAAGTGAAGTCGGAACCAAAGGATGAGCCTGTCTATCTCACAGATCACGAGTGTAGGGGCTTTGAAATTGTGAAACCGGAGGAACACGAAATTAAAAAGGATGAAAATGATGAAAGTAAAGATCAAACGGACTATTCTTGGCTTGATGGTGATGATTTGGAAGGGGATTACTTGCAGAATTTCTCTATGGATGAGATGTTTGATGTGGATGAACTACTGGGGGCGATGGACAAGAATCCAATTGGTGACTATGAAACGTTCGCTTATGATCAAATGGGCGACGCTAGAGATGGAAACCATAAGAGTGAAATGCCATCAAGCTTTTCGTATGAACTGCAAAACCCAGATGCCAAGCTGCTGGGAAGTCTGCCCCACATGGAACAGGCGCCATCAGATGTTGATTATGGATTTGATTTTTTGAAAATAGGGGAGCCAGAGAACAATATTAGAGGCGATGAACAGCAATTTCTTGATTTTGGATTGCCAGATCTGTGA 1143 0.4418 MGVYDQGSNITSLPLDSSRKRKSRSRRDGSKSVAETLAKWKEYNEHPESSKGGGGKPTRRAPAKGSKKGCMKGKGGPDNSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFATAYEAALAYDEAARAMYGACARLNFPNISDYTSCKESLKVSSPATTFSSSSVATPAGSDTTSISNHSEVCAAEDVKTRHQPTKTDDVDNIHLEAGEVALTNMKVKSEPKDEPVYLTDHECRGFEIVKPEEHEIKKDENDESKDQTDYSWLDGDDLEGDYLQNFSMDEMFDVDELLGAMDKNPIGDYETFAYDQMGDARDGNHKSEMPSSFSYELQNPDAKLLGSLPHMEQAPSDVDYGFDFLKIGEPENNIRGDEQQFLDFGLPDL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0100 380 MobiDBLite consensus disorder prediction 17 53 - -
Alju08g0100 380 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 Gene3D AP2/ERF domain 83 141 IPR036955 GO:0003700|GO:0006355
Alju08g0100 380 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Alju08g0100 380 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 CDD AP2 82 141 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 352 - -
Alju08g0100 380 MobiDBLite consensus disorder prediction 242 262 - -
Alju08g0100 380 MobiDBLite consensus disorder prediction 1 16 - -
Alju08g0100 380 MobiDBLite consensus disorder prediction 1 82 - -
Alju08g0100 380 MobiDBLite consensus disorder prediction 159 178 - -
Alju08g0100 380 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Alju08g0100 380 SUPERFAMILY DNA-binding domain 83 140 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0100 Alju-ChrAlju08 851864 853006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0100 8 380 AP2-EREBP Transcription Factor Family AT2G40340 41.558 4.70e-80 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju08g0100 AP2 3.8e-14 CL0081