Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0096 ATGGGTGGGAATTCGCCTTGTGCTTCATGCAAATTGCTCAGACGCCGATGCGCCAGAGACTGCATTTTCGCTCCCTATTTCCCTTCTGACGATCCCCAAAAGTTCGCCATCGTTCACAAGGTTTTTGGCGCCAGCAACGTCAGCAAAATGTTACAGGAACTTCCGGTGTACCAGAGAGCTGATGCTGTGAGCAGTCTAGTGTATGAAGCTAATGCAAGAGTGAGAGACCCGGTTTATGGTTGTGTTGGGGCCATATCGTACCTGCAAAACCAGGTCTCAGAGCTTCAAATGCAGCTCGCGGTGGCTCAGGCAGAGATACTCTGCATCCAGATGCAGAACGATCCGGTGGTGCTGCCGGCAAACCCAGAAATGAACGGCCCTCACCATCACCCCAAGTCTTACTTTCTCGAGAATGACCTTCCTAACTATCTCAATTTCACTTCTTCTGGCAATGTAATTCATCGTGATCACTCTCTCAAGAGAGAGAGCATCTTTGGACATGACTTGGTTTCTTGA 516 0.4942 MGGNSPCASCKLLRRRCARDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVYQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQNDPVVLPANPEMNGPHHHPKSYFLENDLPNYLNFTSSGNVIHRDHSLKRESIFGHDLVS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0096 171 Coils Coil 85 105 - -
Alju08g0096 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 123 - -
Alju08g0096 171 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Alju08g0096 171 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0096 Alju-ChrAlju08 818709 819325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0096 3 117 AS2 family AT2G30130 90.435 1.17e-74 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju08g0096 LOB 2.7e-42 No_clan