Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0062 ATGGGGGAGGGAGGGATGTCAGGGTTTTGCAGTAGGAGTGGCAGCAAGTGTGGGCGTTGGAATCCAACGGCGGAGCAGCTGAAGCTTCTGAGTGAGCTCTTCGCGTCAGGTCTGCGAACACCCAGCACGGACCAGATCCAGAAGATATCCGCTCTCCTCAGCTTTTACGGCCACATTGAGAGCAAGAACGTCTTCTATTGGTTCCAGAACCATAAAGCCCGCGAACGCCTCAAACACCGCAAACTCACTCCTCCTTCTTCTTCACCAATGTTGTACTCAGATACATATAATCAAGTGGTGCCGGAGCCAGAGAGAGTGATGAAGACGCTTCAACTCTTCCCCGTGGCGGAGTCAGAAGCGGGGAAGCTGAGGATCCATGCTCATTACAGAGACGACATCACGGAACCAATGGAACCCCCTCCCTTGGATCTCCGCTTGAGCTTTCTCTAA 450 0.5333 MGEGGMSGFCSRSGSKCGRWNPTAEQLKLLSELFASGLRTPSTDQIQKISALLSFYGHIESKNVFYWFQNHKARERLKHRKLTPPSSSPMLYSDTYNQVVPEPERVMKTLQLFPVAESEAGKLRIHAHYRDDITEPMEPPPLDLRLSFL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0062 149 FunFam WUSCHEL-related homeobox 11 16 84 - -
Alju08g0062 149 CDD homeodomain 19 79 IPR001356 GO:0003677
Alju08g0062 149 SMART HOX_1 15 82 IPR001356 GO:0003677
Alju08g0062 149 Gene3D - 16 82 - -
Alju08g0062 149 ProSiteProfiles 'Homeobox' domain profile. 13 78 IPR001356 GO:0003677
Alju08g0062 149 Pfam Homeodomain 17 76 IPR001356 GO:0003677
Alju08g0062 149 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 11 82 IPR044555 GO:0003700|GO:0099402
Alju08g0062 149 SUPERFAMILY Homeodomain-like 18 79 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0062 Alju-ChrAlju08 498891 499419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0062 13 149 Wox Gene Family AT3G11260 52.096 2.72e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju08g0062 Homeodomain 2.9e-17 CL0123