Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0027 ATGCTACCCAACACCTGCGTCACCTCCGATAAGATCCACGGCGGCATCCTCCTCAACAGCACCCTCCCCTTCAACATCACCAGCAGCAACACCATCCTCTACCTCAACTGTACCCCCACCCTCCTCCTTTCCCCCTTGAACTGCTCCTCCTCCAGCTTCTGCCACACCTACATCAACGCCACCCCACCCGCCTCTCCCTGCCTCCTCGCCCCTATTTGCTGTACTTTCAGGGCTGGTGGCTCCAGCAACTCCTACATGATCCGCGTCCGCGATGTGGGATGCACCGCTTACTCCAGTTTCGTCAACCTCAACCCCTCTCTGCCGCTCACCAGCTGGCCTGAACCGGACCTCGAAATTCAGTGGGTGTCGCCGCGTCAACCGCTCTGTGGGTCCCAGGCGGATTGCGAGGGCGGCAACTCCACTTGTGCGCCGGATCCATCCAGAAGCGGCGTCAAGAGGTGCTTTTGTAACGCCGGCCTTGTCTGGGACCCTATTCAAGGGGTGTGCGCTGAAAAAATCACATGTCAGCAGAGTCCGGATGGTTGCGGCGGCTCCGATCGAACTGCACTAATAGCAGGTTTGACGAGTGGGATTAGCGCAGCAGTGATATTAGCCCTTGTTGCGGTTCTGCTCTACAAACGGCACAGACGTGTGAAGGAGGCCCAAGAACGGCTGATCAGAGAGCGGGAGGGTATCCTGAATGCGAGTGGCGGAGGCAGAGCCGCAAAGCTCTTCTCCGGCAAAGAGCTGAAGAAAGCCACGAACAACTTCTCCAGAGACAGCCTCCTAGGCGCCGGCGGCTACGGCGAAGTCTACAAAGGCGTCCTCCAGGACGGCACCCTCGTAGCCGTCAAATGCGCAAAACTCGGCAACGCCAAAGGCACCGACCAAGTGCTAAACGAGGTGCGTATATTGTGCCAAGTCCATCACCGTAACCTCGTCGGTCTTCTGGGTTGCTGCGTGGAGTTGGACCAGCCCATGATGGTGTATGAGTTCGTAGAGAACGGCACTGTCCTCGATCACCTGTCCAAAGGGTGGGGCTCTCTCACATGGTCTCATCGCCTTCGAATAGCTCACGACACGGCCCAAGAGCTGTTGACGGCGCAGAGGGCTATAGATTTCAACAGGCCAGCGCATGATGTGAACTTGGCGGTGTATGTGCAGAGGATGGCGGAGGAAGAGAAGGTGATGGAGGTCATGGAGCCGGGGCTGAGGAATGGGGCCACCACTTTGGAAGTGGACACCATGAAGGCGTTGGCGTTTTTGGCTCTGGGATGCTTGGAGGAGCGGAGGCAGAACCGACCTTCCATGAAGGAGGTGGTTGAGGAGATTGAGTATATCATTGGTATTGCCACCTCCAAACACGCCCAAAGCTAG 1377 0.5759 MLPNTCVTSDKIHGGILLNSTLPFNITSSNTILYLNCTPTLLLSPLNCSSSSFCHTYINATPPASPCLLAPICCTFRAGGSSNSYMIRVRDVGCTAYSSFVNLNPSLPLTSWPEPDLEIQWVSPRQPLCGSQADCEGGNSTCAPDPSRSGVKRCFCNAGLVWDPIQGVCAEKITCQQSPDGCGGSDRTALIAGLTSGISAAVILALVAVLLYKRHRRVKEAQERLIREREGILNASGGGRAAKLFSGKELKKATNNFSRDSLLGAGGYGEVYKGVLQDGTLVAVKCAKLGNAKGTDQVLNEVRILCQVHHRNLVGLLGCCVELDQPMMVYEFVENGTVLDHLSKGWGSLTWSHRLRIAHDTAQELLTAQRAIDFNRPAHDVNLAVYVQRMAEEEKVMEVMEPGLRNGATTLEVDTMKALAFLALGCLEERRQNRPSMKEVVEEIEYIIGIATSKHAQS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0027 458 Gene3D Phosphorylase Kinase; domain 1 234 332 - -
Alju08g0027 458 Gene3D Transferase(Phosphotransferase) domain 1 361 457 - -
Alju08g0027 458 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 364 447 IPR045274 GO:0007166
Alju08g0027 458 ProSiteProfiles Protein kinase domain profile. 257 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0027 458 Pfam Protein tyrosine and serine/threonine kinase 261 363 IPR001245 GO:0004672|GO:0006468
Alju08g0027 458 FunFam Wall-associated receptor kinase-like 20 219 332 - -
Alju08g0027 458 ProSitePatterns Protein kinases ATP-binding region signature. 263 285 IPR017441 GO:0005524
Alju08g0027 458 SUPERFAMILY Protein kinase-like (PK-like) 242 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0027 Alju-ChrAlju08 295533 297361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0027 364 454 Receptor kinase-like Gene Family AT5G02070 47.253 1.05e-22 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju08g0027 PK_Tyr_Ser-Thr 6.1e-17 CL0016