Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0007 ATGCGTTTCTCTCCTCCACAACCTACCGGCACTGGCTCTTGCGAATCTTCCAATGCTCCGTCCTCTTCCTTTCTAGTTGCAGATCACTACTGTGACTGCAAGCTCAAATTTAGGACCATTCTTAGAAAAATGATCTGGGAGCTTGGTTTTACCTGCGTTGCCCTGCCTCGCCGCCGGCCGTGCTTAGGTAAAAACGACGGCGACGGATATAAAAAGACGAATCTAGAGCACAACAAGGCGTGGTTGCTTGCGGAGTCTGGTGGGTGTGGAGCTGAGGTGATGAATGCTGACCCACAATCTGTTCACTCGTCTTTCCGTTTCAGTTTCTGTTCTCAGGTTGAGCTCGAATCCTCGAGCGTGAATTCTTCCGCTGCTGCGACCGTTTTGATGGTTCATCTGGACGATGGAATGAATAATTCTCGAGCTCGAGAGCTGAAATGTCGGAGGATGGAGTCCTTAGAAAAAAGCATATCCCCTGTAGCCAACTCTTTGATCAGGTTCAACTACGGTGAAATTCTATCTGCTACTCACAGTTTCTCCAAAGGCAGAGTGTTGGGGAGAGGGGCCTTGAGCTGTGTATTTAGGGGTAGAGTTGGGCTTTTGAGGACTGCTGTAGCAATCAAACGATTGGACAAGGAAGACAAGGAATCTACAAAGGCGTTCTGTAGAGAACTGATGATTGCCAGTTCTCTTCATAACCCAAACGTTGTTTCCCTTGTGGGTTTTTGTATTGACCCTGAGGAGGGTTTATTTCTGGTGTACAAATATGTCTCTGGGGGCAGCCTAGAGCACCATTTGCATGAAAGGAAGGGTGTGAACGGCAGTTCTCCACTATCCTGGTCTGTGAGGTATAAAGTTGCGACTGGAATTGCAGAAGCCGTGGCTTATCTGCATAACGGAACTGAAAGATGCGTTGTTCACCGAGACATTAAACCCTCAAACATTCTCCTTTCCTCCAAAAAGACTCCTAAGTTGTGCGATTTTGGATTAGCTACATGGACTCCTGCACCTTCAGTTCCTTTCCTCTGTGAAACAGTCAAGGGAACATTTGGTTATTTGGCTCCTGAGTATTTCCAACATGGAAAAGTATCTGATAAGACTGATGTTTATGCTTTCGGAGTTGTTTTATTGGAACTCATAACTGGCCGGAAGCCAATAGAGGCAAAAAAGCCACCAGGAGAGGAGAACTTGGTCTTATGGGCTAAACCCTTGCTACAGAAAGGGCAGGGCGCCATTGAAGAGTTGCTGGATCCTCGACTCAAGTGCAGTTTGAGATTCTCTAATCAGATGGCTTGGATGATAGAGGCAGCTGCTGCTTGTGTTACAAATGAAGAATCTCGGAGACCTGGAATACAAGAGATTATTGCAATACTGAGAGGTCACGAAGAACGTGTCTGGCCTAAAAGGAAGAAGTCTGGTCTACTAGGGAATGGGTTGGTAGTTGATTGCTACCCTCAACTACAACAAACAAATAACGAGATGAAAAGACACTTGGCTCTGGCAATGCTAGGAGTTTCAGAGTTTGAAGATGATGATTATCTATATGGCCGTTGA 1554 0.462 MRFSPPQPTGTGSCESSNAPSSSFLVADHYCDCKLKFRTILRKMIWELGFTCVALPRRRPCLGKNDGDGYKKTNLEHNKAWLLAESGGCGAEVMNADPQSVHSSFRFSFCSQVELESSSVNSSAAATVLMVHLDDGMNNSRARELKCRRMESLEKSISPVANSLIRFNYGEILSATHSFSKGRVLGRGALSCVFRGRVGLLRTAVAIKRLDKEDKESTKAFCRELMIASSLHNPNVVSLVGFCIDPEEGLFLVYKYVSGGSLEHHLHERKGVNGSSPLSWSVRYKVATGIAEAVAYLHNGTERCVVHRDIKPSNILLSSKKTPKLCDFGLATWTPAPSVPFLCETVKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKKPPGEENLVLWAKPLLQKGQGAIEELLDPRLKCSLRFSNQMAWMIEAAAACVTNEESRRPGIQEIIAILRGHEERVWPKRKKSGLLGNGLVVDCYPQLQQTNNEMKRHLALAMLGVSEFEDDDYLYGR 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0007 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Alju08g0007 517 SUPERFAMILY Protein kinase-like (PK-like) 166 464 IPR011009 -
Alju08g0007 517 ProSiteProfiles Protein kinase domain profile. 179 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0007 517 Pfam Protein kinase domain 180 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g0007 517 FunFam Putative receptor-like serine/threonine-protein kinase 257 473 - -
Alju08g0007 517 Gene3D Transferase(Phosphotransferase) domain 1 257 472 - -
Alju08g0007 517 FunFam probable serine/threonine-protein kinase PBL7 140 256 - -
Alju08g0007 517 PANTHER OS08G0249100 PROTEIN 135 470 IPR046958 -
Alju08g0007 517 Gene3D Phosphorylase Kinase; domain 1 163 256 - -
Alju08g0007 517 SMART serkin_6 179 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0007 Alju-ChrAlju08 69135 71743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0007 167 502 Trihelix Transcription Factor Family AT1G70460 40.351 1.01e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju08g0007 Pkinase 1.9e-45 CL0016