Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2994 ATGGGAAACTGCCTGGACAAAATTGGCACAAGCCCAAACACTAGTGCCAGCGCTGCAGCTTCAGATGCCGTAGACTTGGATTATTGGGCGGGGCCAAGTCCCACGGGCACGATTGTTACGACGCCAAATCTAAAAATGTTCGGTTTAGAGGAGCTCAAGAGTGCCACCAGAAACTTCAGACCCGACACAGTGTTGGGGGAGGGTGGCTTTGGCAGAGTATTCAAGGGGTGGATCGACCAAAACAACCTCAAGCCCTCCAAAGTTGGCGTTGGAATCCCCGTCGCCGTCAAGAGATCTAATCCTGATAGTCTTCAGGGCTTAGAAGAATGGCAGAGCGAGGTAAAATTCCTGGGAAAGTTCTCTCATCCCAACCTGGTGAAGCTCATTGGCTACTGCTGGGAGGAGAATCAGCTAATGCTTGTATACGAATACATGCAGAAGGGCAGCTTGGAAAACCACCTCTTTGGAAGAGGACCCGACCCACTTGCATGGGACGTAAGGGTCAAGATCGCCATAGGAGCAGCTCGAGGCCTGGCCTTCCTCCACGCCTCCGAGAAGTCTGTTATCTATAGGGACTTCAAGTCCTCCAACATTTTGCTGGATGGGGAGTTCAACGCCAAGCTTTCAGATTTCGGGCTGGCCAAGCTAGGCCCCGTCAACGGCAGATCCCACATAACCACCCGAGTCATGGGCACTTACGGCTATGCGGCCCCCGAGTACATAGCCACCGGCCATCTGTATGTGAAAAGCGACGTGTACGGGTTTGGCGTAGTGCTGCTAGAAATTCTGACAGGCTTGGTGGCGCTTGATCCCAACAGGCCTGGAGGGGAGCAAAATTTGGTGGATTGGAAGAAACCATATTTGAGCCATAAGAAGAGGCTGAGAACCATAATAGACCCAAAACTGGGCCGCAAGTATCCCCTAAGCGCCGCATTTAACATATGCCGCCTCATTCTCAACTGTTTAGAACCCGATCCCAAAAATCGACCCTCCATGACGGATGTGTTGATCACTTTAGAGAGGGCCTATCGCACCCCATATAATCCCAAGCCCAACTCTAAGGCACAGCCCATAAAGCCCGCTGCCCTTCCCCCACCCTCTCCCTCTCCAATTCCTTAG 1119 0.5246 MGNCLDKIGTSPNTSASAAASDAVDLDYWAGPSPTGTIVTTPNLKMFGLEELKSATRNFRPDTVLGEGGFGRVFKGWIDQNNLKPSKVGVGIPVAVKRSNPDSLQGLEEWQSEVKFLGKFSHPNLVKLIGYCWEENQLMLVYEYMQKGSLENHLFGRGPDPLAWDVRVKIAIGAARGLAFLHASEKSVIYRDFKSSNILLDGEFNAKLSDFGLAKLGPVNGRSHITTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGLVALDPNRPGGEQNLVDWKKPYLSHKKRLRTIIDPKLGRKYPLSAAFNICRLILNCLEPDPKNRPSMTDVLITLERAYRTPYNPKPNSKAQPIKPAALPPPSPSPIP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2994 372 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 145 351 - -
Alju07g2994 372 CDD STKc_IRAK 65 341 - -
Alju07g2994 372 ProSitePatterns Protein kinases ATP-binding region signature. 65 97 IPR017441 GO:0005524
Alju07g2994 372 SUPERFAMILY Protein kinase-like (PK-like) 37 349 IPR011009 -
Alju07g2994 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Alju07g2994 372 Gene3D Phosphorylase Kinase; domain 1 43 144 - -
Alju07g2994 372 MobiDBLite consensus disorder prediction 358 372 - -
Alju07g2994 372 Pfam Protein tyrosine and serine/threonine kinase 63 336 IPR001245 GO:0004672|GO:0006468
Alju07g2994 372 MobiDBLite consensus disorder prediction 346 372 - -
Alju07g2994 372 Gene3D Transferase(Phosphotransferase) domain 1 145 355 - -
Alju07g2994 372 ProSiteProfiles Protein kinase domain profile. 59 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju07g2994 372 FunFam Serine/threonine-protein kinase BIK1 31 144 - -
Alju07g2994 372 PANTHER OS01G0588500 PROTEIN-RELATED 26 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g2994 Alju-ChrAlju07 54961214 54962749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g2994 45 339 Glycoside Hydrolase AT3G07070 50.336 1.10e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju07g2994 PK_Tyr_Ser-Thr 2.3e-45 CL0016