Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g2989 ATGATTGAAAAGAAGGAGGAGTTTCTCATTGTGGCGCCATTTGAGTGCGCATGGCGAAAAGATTTGAAATTCCGAGAAGCAGGTCGGGGTTGCGTGGTTTTCGAAGCCTTTGCGCGCAACGATATCACTTTGGTTTTTCGGGAGAATGTGGGAAGTCGGCACTACCATTATAAAAGGGATAATAGCCCCCACTATACCGTCATTTTGGGGAGCCATAGGAATAGAAGGCTGAGAATTGAGGTTGATGGAAAAACTGTTGTTGATGTGGCTGGTGCTGGACTTTGTTGCTCTTCATCATTCCAGAGTTATTGGATCAGCATCTACGATGGGTTGATTAGCATCGGCAAAGGAAAATACCCTTTCCAGAATATTGTCTTCCAGTGGCTGGATTCTAATCCTAACTATAATGTTCAGTATATTGGGCTCTGCAGCTGGGATAAACACGTTGGATATAGAAATGTTAATGTGTTGTCGTTAACACACAATCATATGTCCCAGTGGAAGCACGTCAGTTTTGGTGAATATGAAGTTGAGGAGGAGGGTGAGGAGGAGTTGGGAGACAAACCGATGGATTATGACAATTGGGGGCTGAAAAATTTTCTGGAGAGCTGGGAATTGTCTGACGTTTTATTCATTGTTGGTGCAGAGGAAACACCTGTACCTGCTCATAAGACCATTTTATCAGCATGTGGGGATTTTCCTTTAGCCTTATCATTCTCTGTTATTTCGCTGCCCACAGTTACTTACCCGGTTTTTCACGCACTGCTGCAGTATATCTACGCTGGCTGGACTGAGATTCCTCTGGAACAACTTGGTTCCTTGAGGGCTCTAGGTTTACAGTTTGAAGTGATGCCATTGGTTAAGCAATGTGAAGAGACTATGGAGCGGTTTAAGATAAACCAAAAGTTTGTCTCGGGGAAGAATGTGGAGTTATCATTTCAAAGTACTAGGCCTCATTGTTGTTCAACTTTGCCCTCACTTCCTGTCAATAGTCAGAGACTGAAACAATTGCAATTAACTGGCCAGTACAGTGATGTAAGCGTATATATTGAGGGTTATGGACTTATTGCCCAAGCACATAAAATTGTTCTCAGTTTATGGAGCATCCCATTTGCCAAGATGTTCACAAACGGAATGAGTGAAAGTATGTCTTCAGAGATTACTTTAAGGGATGTGCCACCAGAAGCTTTCAAGGCTATGTTTGACTTTTTATACTTTGGGAAACTAAATGATGAAGTTAACATAGATTCTGGTTCTTTGTTGCTCGAGCTGCTTTTAGTGGCTGACCAATTTGGAGTGACTCTTCTTCACCAGGAGTGCTGTAAAATGCTTCTAGAATGCCTCTCAGAGGGATGGAGTCTCTTGGGTGAAGGACTCATTATGTCCACTCCTTCAAGTGGTTTCTTCGATCCCATCATGTAG 1422 0.429 MIEKKEEFLIVAPFECAWRKDLKFREAGRGCVVFEAFARNDITLVFRENVGSRHYHYKRDNSPHYTVILGSHRNRRLRIEVDGKTVVDVAGAGLCCSSSFQSYWISIYDGLISIGKGKYPFQNIVFQWLDSNPNYNVQYIGLCSWDKHVGYRNVNVLSLTHNHMSQWKHVSFGEYEVEEEGEEELGDKPMDYDNWGLKNFLESWELSDVLFIVGAEETPVPAHKTILSACGDFPLALSFSVISLPTVTYPVFHALLQYIYAGWTEIPLEQLGSLRALGLQFEVMPLVKQCEETMERFKINQKFVSGKNVELSFQSTRPHCCSTLPSLPVNSQRLKQLQLTGQYSDVSVYIEGYGLIAQAHKIVLSLWSIPFAKMFTNGMSESMSSEITLRDVPPEAFKAMFDFLYFGKLNDEVNIDSGSLLLELLLVADQFGVTLLHQECCKMLLECLSEGWSLLGEGLIMSTPSSGFFDPIM 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g2989 473 PANTHER OS05G0345500 PROTEIN 2 448 - -
Alju07g2989 473 Pfam BTB/POZ domain 197 295 IPR000210 GO:0005515
Alju07g2989 473 Pfam BTB/POZ domain 334 446 IPR000210 GO:0005515
Alju07g2989 473 CDD BTB_POZ_ZBTB_KLHL-like 343 414 - -
Alju07g2989 473 Gene3D Potassium Channel Kv1.1; Chain A 195 316 IPR011333 -
Alju07g2989 473 SUPERFAMILY POZ domain 196 295 IPR011333 -
Alju07g2989 473 Gene3D Potassium Channel Kv1.1; Chain A 328 450 IPR011333 -
Alju07g2989 473 ProSiteProfiles BTB domain profile. 207 268 IPR000210 GO:0005515
Alju07g2989 473 SUPERFAMILY POZ domain 331 445 IPR011333 -
Alju07g2989 473 Pfam Farnesoic acid 0-methyl transferase 53 149 IPR022041 -
Alju07g2989 473 ProSiteProfiles BTB domain profile. 344 413 IPR000210 GO:0005515
Alju07g2989 473 SMART BTB_4 207 298 IPR000210 GO:0005515
Alju07g2989 473 SMART BTB_4 344 448 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju07g2989 BTB 1.5e-19 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2989 07 54909337 54917205 Alju07g2989 07 54909337 54917205 ECH